PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_013592375.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Family | EIL | ||||||||
Protein Properties | Length: 585aa MW: 65727.1 Da PI: 5.0028 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 433.9 | 1.5e-132 | 41 | 365 | 1 | 324 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 e+l++rmwkd+++lkr+ker+k + + ++ +k+++qa+rkkmsraQDgiLkYMlk mevc+++GfvYgiipekgkpv+g+sd++raWW XP_013592375.1 41 EDLERRMWKDRVRLKRIKERQKGDS--QGP-QAKEPPKKISDQAQRKKMSRAQDGILKYMLKLMEVCKVRGFVYGIIPEKGKPVSGSSDNIRAWW 132 89********************965..555.4456689********************************************************* PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS EIN3 96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190 kekv+fd+ngpaai+ky+ ++l++++++++ ++++ l++lqD+tlgSLLs+lmqhcdppqr++plekg++pPWWPtGke+ww +lgl+++q XP_013592375.1 133 KEKVKFDKNGPAAIAKYEEECLAFGKSDGN----RNSQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGKEEWWVKLGLPQSQ 223 ************************987777....77999******************************************************** PP -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX...XX.....XXXX....XXXX CS EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah...ss.....slrk....qspk 273 + ppy+kphdlkk+wkv+vLtavi+hmsp+i++i++++rqsk+lqdkm+akes+++l+vlnqee+++++ s++ s+ + +++k XP_013592375.1 224 S-PPYRKPHDLKKMWKVGVLTAVINHMSPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQEESLIQQPSSDngtSNvtethR--RgnnaDRRK 315 9.9**********************************************************************65422787540..334458889 PP XXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX. CS EIN3 274 vtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsske 324 +++++++++dv+g++e + + ++++++++++p++ ++ + +++ k+ +++ XP_013592375.1 316 TVINSDSDYDVDGTEEASGSVSSKDSRRNQVPAATSQQ-PVRDQDKAGKHK 365 99**********99999999999999999555555544.333333333332 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 1.0E-125 | 41 | 286 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 3.7E-71 | 162 | 294 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 8.5E-61 | 167 | 289 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042762 | Biological Process | regulation of sulfur metabolic process | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 585 aa Download sequence Send to blast |
MGGGDLALSV ADIRMENEQP DDLASDTVAE IDVSDEEIDA EDLERRMWKD RVRLKRIKER 60 QKGDSQGPQA KEPPKKISDQ AQRKKMSRAQ DGILKYMLKL MEVCKVRGFV YGIIPEKGKP 120 VSGSSDNIRA WWKEKVKFDK NGPAAIAKYE EECLAFGKSD GNRNSQFVLQ DLQDATLGSL 180 LSSLMQHCDP PQRKYPLEKG TPPPWWPTGK EEWWVKLGLP QSQSPPYRKP HDLKKMWKVG 240 VLTAVINHMS PDIAKIKRHV RQSKCLQDKM TAKESAIWLA VLNQEESLIQ QPSSDNGTSN 300 VTETHRRGNN ADRRKTVINS DSDYDVDGTE EASGSVSSKD SRRNQVPAAT SQQPVRDQDK 360 AGKHKRRKRP RIRSGTLNVQ DEEQVEAEGR NVLPDMNHVE APMLDYNING TTNHHEEGVL 420 EPNISLGPEE NGLELVVPEF DSNYTYLPPV DGQAMMPVDE RPMLYGANPN QELQFGSGYN 480 YYNTSAVFVH NQEEDLIHTQ IEMNSQAPPH SNGFDGQGGV LQPHGNEEVG VAGRDMPPQF 540 QSDQDKLLDS NILSPFNDLP FDSSTFYSGF DSFGAFDDDY SWFGA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wij_A | 1e-84 | 166 | 297 | 9 | 140 | ETHYLENE-INSENSITIVE3-like 3 protein |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00233 | DAP | Transfer from AT1G73730 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_013592375.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013592375.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein isoform X1 | ||||
Swissprot | O23116 | 0.0 | EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein | ||||
TrEMBL | A0A0D3D0F8 | 0.0 | A0A0D3D0F8_BRAOL; Uncharacterized protein | ||||
STRING | Bo6g118030.1 | 0.0 | (Brassica oleracea) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM4658 | 25 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 0.0 | ETHYLENE-INSENSITIVE3-like 3 |
Publications ? help Back to Top | |||
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