 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_013588466.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
| Family |
MYB |
| Protein Properties |
Length: 264aa MW: 30080.8 Da PI: 5.1059 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_013588466.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 52.2 | 1.4e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g WT+eEd lv +++++G g+W++ +++ g+ R++k+c++rw++yl
XP_013588466.1 14 KGEWTAEEDRMLVAYINEYGLGDWRAMPKRAGLQRCGKSCRLRWLNYL 61
799*******************************************97 PP
|
| 2 | Myb_DNA-binding | 56.6 | 6.1e-18 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg++T++E++ +++ + +lG++ W++Ia++m+ +Rt++++k++w++
XP_013588466.1 67 RGKFTPQEEKDIIKFHSLLGNR-WAAIAKEMP-NRTDNDIKNHWNSC 111
89********************.*********.***********975 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 264 aa
Download sequence Send
to blast |
MGRTTWYDDE GLKKGEWTAE EDRMLVAYIN EYGLGDWRAM PKRAGLQRCG KSCRLRWLNY 60
LRPGIKRGKF TPQEEKDIIK FHSLLGNRWA AIAKEMPNRT DNDIKNHWNS CLKKRLVRSG 120
IDPMTHQPVV NVKANSSSTT SSPTLTPSSS STTSSFSSTS SSRLLNRLAA EISSRKQGFD 180
RIKNVILSEP RQAVEEDKLM ISSKEEEEEV DGCFMEIDDN LISTTSLYEL LSEPYDMYQS 240
DFGLEVDDQF DLFLEIPSLG QDLS
|
| Expression --
Description ? help
Back to Top |
| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in trichomes, stems, carpels, petals and stamens. {ECO:0000269|PubMed:18805951}. |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Functions as a repressor of epidermal cell outgrowth and negatively regulate trichome branch formation (PubMed:18805951, PubMed:21070410). Acts as both a positive and negative regulator of cellular outgrowth. Promotes both trichome expansion and branch formation (PubMed:21070410). Coordinately with WIN1/SHN1, participates in the regulation of cuticle biosynthesis and wax accumulation in reproductive organs and trichomes. Functions in cuticle nanoridge formation in petals and stamens, and in morphogenesis of petal conical cells and trichomes (PubMed:23709630). May play a role in the regulation of cuticle formation in vegetative organs (PubMed:24169067). {ECO:0000269|PubMed:18805951, ECO:0000269|PubMed:21070410, ECO:0000269|PubMed:23709630, ECO:0000269|PubMed:24169067}. |
