PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012575135.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bZIP
Protein Properties Length: 362aa    MW: 40884.6 Da    PI: 6.1119
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012575135.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.93.2e-1175115342
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee.kvkeLeaeN 42 
                     + k  rr+++NReAAr+sR+RKka++++Le  +vk L+ e 
  XP_012575135.1  75 DHKTLRRLAQNREAARKSRLRKKAYVQQLESsRVKLLQLEQ 115
                     67899************************963788777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.9E-873136IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.10575119IPR004827Basic-leucine zipper domain
PfamPF001701.3E-876114IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.88E-777119No hitNo description
CDDcd147086.17E-2277129No hitNo description
Gene3DG3DSA:1.20.5.1701.2E-779112No hitNo description
PROSITE patternPS0003608095IPR004827Basic-leucine zipper domain
PfamPF141442.0E-27160234IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MANCHVENWG DSGMADNSQQ TDDTSTDIDV DVDIDIDTDD KHQSNRGKSX XXXXXKSGTN  60
MVSHSKDQTN FKAEDHKTLR RLAQNREAAR KSRLRKKAYV QQLESSRVKL LQLEQELQRA  120
HQQGIFIATP GDQVHLPVGN GALAFDMDYA HWVDEHQHLL NDLQSGLNSQ MGDNELHLLV  180
DGVMEHYNEL SRLKSIGAKA DIFHMLYGLW KTPVERCFIW LGGFRPSDLL KIIKSHLEPL  240
TDHELIGICN LQQTSEQSED ALTQGMEALQ QSILEMLSTT SSVSSTGSGN VADYMDQMAI  300
AMSKLAVLEE FLHKADLLKQ ATLQQLQRIL TTRQTARALL VKNDYISRLR ALSSLWLARP  360
RE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012575135.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCU3023324e-52CU302332.2 Medicago truncatula chromosome 5 clone mth2-139e15, COMPLETE SEQUENCE.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012575135.10.0transcription factor TGA2.3-like isoform X1
SwissprotQ415581e-146HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A1S3EH300.0A0A1S3EH30_CICAR; transcription factor TGA2.3-like isoform X1
STRINGXP_004513994.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-114bZIP family protein