PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012575090.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 475aa    MW: 52437.8 Da    PI: 5.9265
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012575090.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.57.7e-30271329259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg++WrKYGqK+ kg++ pr+YYrCt+  +C v+k+v+r+aed +v+++tYeg+Hnh 
  XP_012575090.1 271 SDGCQWRKYGQKMAKGNPSPRAYYRCTMGlNCLVRKQVQRCAEDRSVLVTTYEGQHNHA 329
                     7***************************99****************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.0E-32255331IPR003657WRKY domain
SuperFamilySSF1182902.48E-27262331IPR003657WRKY domain
PROSITE profilePS5081128.483265331IPR003657WRKY domain
SMARTSM007743.4E-35270330IPR003657WRKY domain
PfamPF031063.4E-25272328IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    Send to blast
MEETICNDAI GNSSEGSHSP SQVIMMSFNG KRLIVDELDF FAEEKLSPDN HQMLHQMEEE  60
HYVDTSLDLF TKISPSNKST MEDEELGATT NNKKEFDALM GELHQMHAEN QRLRELVDRV  120
SNDYNALDEN VVKLMQKEHK QEINNGAKEE KGKNVISMPF LEMNFDKEET SQQSPKGKEI  180
REKRNMVDLM ECDNQKTKKI CGSGDIVHKL EPQKKMDNEI SPTNNNGFPG WLTNQVPRFN  240
SFKSVDDKAS ESMIKKARVS VRTRSEATMI SDGCQWRKYG QKMAKGNPSP RAYYRCTMGL  300
NCLVRKQVQR CAEDRSVLVT TYEGQHNHAL PPTAKAMAST TSAAASMLLS GSMPSADGYI  360
NPAILESAGF PCSHSMATLS ASAPFPTITL DLTKKPTTSP FYDHNCMSTP NIFGSQIMEP  420
ATFAETVSAA TAAVTSDPKF TAALVAAITS MIGSSHPNNN GANGTNGDQQ SNNTT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-22261331877Probable WRKY transcription factor 4
2lex_A5e-22261331877Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012575090.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027186098.10.0probable WRKY transcription factor 31
TrEMBLA0A3Q7XI910.0A0A3Q7XI91_CICAR; probable WRKY transcription factor 31
STRINGXP_004513896.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF139131222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22070.13e-70WRKY DNA-binding protein 31