PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012574642.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bZIP
Protein Properties Length: 405aa    MW: 43415.7 Da    PI: 6.9747
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012574642.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_165.87.7e-21309371163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L+ e+++++ e+++l se+
  XP_012574642.1 309 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLKEENASLRLEVSRIRSEYEQLLSEN 371
                     89***********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.2E-29196IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.6E-52138276No hitNo description
Gene3DG3DSA:1.20.5.1704.2E-18302368No hitNo description
PfamPF001707.5E-20309371IPR004827Basic-leucine zipper domain
SMARTSM003384.8E-22309373IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.173311374IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.88E-11312368No hitNo description
CDDcd147023.18E-23314364No hitNo description
PROSITE patternPS000360316331IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MGNSEMDKSA KEKESKTPPP TSQEQTSTTT STGPVNPDWA SFQAYSPMPP HGFMASSPQA  60
HPYMWGVQHI MPPYGTPPHP YVMYPHGGIY AHPSMPPVIN GSYPFSPYAM PTPNGIAEAS  120
GNTPASMEAD GKPHEVKEKL SIKRSKGSLG SLNMITGKNN EHSKTAGTST NGNHSKSGES  180
ASFEGTSEGS DANSQNDSQL KPGDRRDSFE GEPSQNGSTV HTSQNGGLNT APTGVNQTMS  240
ILPISAGGAP GAVPGPATNL NIGMEYWGTP TSSNIPALRG KVPSTTVAGG IVTGGSRDSV  300
QSQLWLQDER ELKRQRRKQS NRESARRSRL RKQAECDELA QRAEVLKEEN ASLRLEVSRI  360
RSEYEQLLSE NTALKEKLGE QPGNDQHVRN DTQQSGQTEA VQGGH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325331RRSRLRK
2325332RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012574642.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012574642.10.0bZIP transcription factor 16 isoform X1
SwissprotQ501B21e-158BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A1S3EFN10.0A0A1S3EFN1_CICAR; bZIP transcription factor 16 isoform X1
STRINGAES957320.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40173256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-152basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]