PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012573814.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bZIP
Protein Properties Length: 402aa    MW: 43113.6 Da    PI: 6.398
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012573814.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.11.5e-21308370163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L +eN +L+ el+++k e++k  se+
  XP_012573814.1 308 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLNEENASLRAELNRIKSEYEKILSEN 370
                     89********************************************************99997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077775.8E-29198IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.7E-52137276No hitNo description
Gene3DG3DSA:1.20.5.1701.5E-17301366No hitNo description
SMARTSM003381.7E-20308372IPR004827Basic-leucine zipper domain
PfamPF001707.1E-20308370IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.955310373IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.25E-10311366No hitNo description
CDDcd147027.04E-25313363No hitNo description
PROSITE patternPS000360315330IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MGSSDVDKPL KEKEPKTPPA ATSQEQTSTT TGTAAVNPDW ANYQAYSHIP PPGFMASSPQ  60
AHPYMWGVQH IMPPYGTPPH PYVAMYPHGG IYAHPSMPPG SYPFSPFAMP SPNGMVDASG  120
NTPGSSEADG KPHEVKEKLP IKRSKGSLGS MNMVPVPGKN NELGKTPGVS ANGIHSKSGE  180
SASEGTSEGS DENSHNDSQL KSGERQDSYE DEPSQNGSSV HAPQNGVLNT PHTVVNQTMS  240
VVPMSAAGPL TAVPGPTTNL NIGMDYWGTP TSSTMPAMHG KVPSAAVAGG MVNAGSRDVH  300
SQLWLQDERE LKRQRRKQSN RESARRSRLR KQAECDELAQ RAEVLNEENA SLRAELNRIK  360
SEYEKILSEN AALKERLGEI PRTEDLGPGQ NDQHVEATQQ SG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1324330RRSRLRK
2324331RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012573814.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1470380.0BT147038.1 Medicago truncatula clone JCVI-FLMt-21A15 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012573814.10.0bZIP transcription factor 16-like
RefseqXP_027192410.10.0bZIP transcription factor 16-like
RefseqXP_027192411.10.0bZIP transcription factor 16-like
SwissprotQ501B21e-163BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A1S3EEK80.0A0A1S3EEK8_CICAR; bZIP transcription factor 16-like
STRINGGLYMA08G34280.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40173256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-151basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]