PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_012572806.1

Organism

Cicer arietinum

Taxonomic ID

3827

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer

Family

bZIP

Protein Properties

Length: 480aa MW: 53314.8 Da PI: 6.5141

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_012572806.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.6	3.6e-10	178	208	5	35
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekv 35 k rr+++NReAA++sR+RKka++++Le+ XP_012572806.1 178 KTLRRLAQNREAAKKSRLRKKAYVQQLETSR 208 6789************************855 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.1E-6	169	219	No hit	No description
SMART	SM00338	4.3E-5	174	232	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.956	176	220	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.24E-6	178	220	No hit	No description
Pfam	PF00170	1.4E-7	178	218	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	181	196	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	1.5E-25	259	333	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence Send to blast
MASQRIGEIG SSESEPSSQH VPYGVLHGIT TSTSSLMNQG SSFDFGELEE AIVLQGIKIR 60 NDEGKASLFT SKPAATLEMF PSWPIRFQQT PRLGGSKSGG ESTDSGSTEL QFDTDSPISV 120 KASSSDHQNR AFDQIQQQET ATNDVLRTET SQNQSTAKSY QEKKKGASST SEKTLDPKTL 180 RRLAQNREAA KKSRLRKKAY VQQLETSRLR LANLEQDLQR ARSQGLFMGC GGNTSPGKPG 240 AAIFDMEYAR WVEEDERQLV EVRNGLQGAL TDNELRVIVE GYLCHYDELF QLKGVAVHSD 300 VFHLINGIWT SPAERPFLWI GGFRPSDLIT MLMQQLEPLA EQQMVGICEL RHSSHQAEDA 360 LTQGHEQLQH SIVHTIAGGP VVDGVQQMVA AMAKISSLEG FVRQGDNLRQ QSLHQLCRIL 420 TVRQAARCFL IIGEYYGRLR ALSSLWTSRP RETLITDDNS CQATTELQML QPSHSHFSSF

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence Send to blast

MASQRIGEIG SSESEPSSQH VPYGVLHGIT TSTSSLMNQG SSFDFGELEE AIVLQGIKIR  60
NDEGKASLFT SKPAATLEMF PSWPIRFQQT PRLGGSKSGG ESTDSGSTEL QFDTDSPISV  120
KASSSDHQNR AFDQIQQQET ATNDVLRTET SQNQSTAKSY QEKKKGASST SEKTLDPKTL  180
RRLAQNREAA KKSRLRKKAY VQQLETSRLR LANLEQDLQR ARSQGLFMGC GGNTSPGKPG  240
AAIFDMEYAR WVEEDERQLV EVRNGLQGAL TDNELRVIVE GYLCHYDELF QLKGVAVHSD  300
VFHLINGIWT SPAERPFLWI GGFRPSDLIT MLMQQLEPLA EQQMVGICEL RHSSHQAEDA  360
LTQGHEQLQH SIVHTIAGGP VVDGVQQMVA AMAKISSLEG FVRQGDNLRQ QSLHQLCRIL  420
TVRQAARCFL IIGEYYGRLR ALSSLWTSRP RETLITDDNS CQATTELQML QPSHSHFSSF

Functional Description ? help Back to Top
Source	Description
UniProt	Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269\|PubMed:20805327, ECO:0000269\|PubMed:27717447}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_012572806.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by flg22 in leaves. {ECO:0000269\|PubMed:27717447}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012572806.1	0.0	transcription factor TGA9 isoform X3
Swissprot	Q93XM6	0.0	TGA9_ARATH; Transcription factor TGA9
TrEMBL	A0A1S3ECX7	0.0	A0A1S3ECX7_CICAR; transcription factor TGA9 isoform X3
STRING	XP_004506170.1	0.0	(Cicer arietinum)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	0.0	bZIP family protein

Publications ? help Back to Top
Gutsche N,Zachgo S The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22. Plant Sci., 2016. 252: p. 12-21 [PMID:27717447] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]