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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_012572805.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | bZIP | ||||||||
Protein Properties | Length: 490aa MW: 54363.9 Da PI: 6.3987 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.6 | 3.7e-10 | 191 | 221 | 5 | 35 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekv 35 k rr+++NReAA++sR+RKka++++Le+ XP_012572805.1 191 KTLRRLAQNREAAKKSRLRKKAYVQQLETSR 221 6789************************855 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-6 | 182 | 232 | No hit | No description |
SMART | SM00338 | 4.3E-5 | 187 | 245 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.956 | 189 | 233 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.31E-6 | 191 | 233 | No hit | No description |
Pfam | PF00170 | 1.4E-7 | 191 | 231 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 194 | 209 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.6E-25 | 269 | 343 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 490 aa Download sequence Send to blast |
MASQRIGEIG SSESEPSSQH VPYGVLHGIT TSTSSLMNQG SSFDFGELEE AIVLQGIKIR 60 NDEGKASLFT SKPAATLEMF PSWPIRFQQT PRLVASLTSP SLTNPYGGSK SGGESTDSGS 120 TELQFDTDSP ISVKASSSDH QNRAFDQIQQ QETATNDVLR TETSQNQSTA KSYQEKKKGA 180 SSTSEKTLDP KTLRRLAQNR EAAKKSRLRK KAYVQQLETS RLRLANLEQD LQRARSQGLF 240 MGCGGNTSPG AAIFDMEYAR WVEEDERQLV EVRNGLQGAL TDNELRVIVE GYLCHYDELF 300 QLKGVAVHSD VFHLINGIWT SPAERPFLWI GGFRPSDLIT MLMQQLEPLA EQQMVGICEL 360 RHSSHQAEDA LTQGHEQLQH SIVHTIAGGP VVDGVQQMVA AMAKISSLEG FVRQGDNLRQ 420 QSLHQLCRIL TVRQAARCFL IIGEYYGRLR ALSSLWTSRP RETLITDDNS CQATTELQML 480 QPSHSHFSSF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_012572805.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012572805.1 | 0.0 | transcription factor TGA9 isoform X2 | ||||
Swissprot | Q93XM6 | 0.0 | TGA9_ARATH; Transcription factor TGA9 | ||||
TrEMBL | A0A1S3EAF0 | 0.0 | A0A1S3EAF0_CICAR; transcription factor TGA9 isoform X2 | ||||
STRING | XP_004506170.1 | 0.0 | (Cicer arietinum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.3 | 0.0 | bZIP family protein |
Publications ? help Back to Top | |||
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