PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012572322.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family CAMTA
Protein Properties Length: 979aa    MW: 109207 Da    PI: 6.2517
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012572322.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1175.95.2e-55131292117
            CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 
                     ++e ++rwlk+ e++ iL+n+ek+++t+e++++p+sgsl+L+nr+++r+fr+DG+ w+kk+dg++v E+he+LKvg+ve+l+cyYah+e+ ptfq
  XP_012572322.1  13 YQEaQRRWLKPAEVMYILQNHEKYQFTQEPPQQPTSGSLFLFNRRVLRFFRRDGHAWRKKRDGRAVGEAHERLKVGNVEALNCYYAHGEQIPTFQ 107
                     566699***************************************************************************************** PP

            CG-1  96 rrcywlLeeelekivlvhylev 117
                     rr+yw+L+ ++++ivlvhy+++
  XP_012572322.1 108 RRSYWMLDPAFDHIVLVHYRDT 129
                     *******************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143779.6929135IPR005559CG-1 DNA-binding domain
SMARTSM010763.6E-7612130IPR005559CG-1 DNA-binding domain
PfamPF038592.5E-4715128IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.104.7E-9410501IPR013783Immunoglobulin-like fold
SuperFamilySSF812969.66E-18416500IPR014756Immunoglobulin E-set
CDDcd001028.92E-6416501No hitNo description
PfamPF018334.5E-8416499IPR002909IPT domain
Gene3DG3DSA:1.25.40.204.8E-15610706IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029714.955612704IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484036.37E-16614706IPR020683Ankyrin repeat-containing domain
CDDcd002048.38E-13617704No hitNo description
PfamPF127962.9E-7627705IPR020683Ankyrin repeat-containing domain
SMARTSM002480.0038645674IPR002110Ankyrin repeat
PROSITE profilePS5008811.06645677IPR002110Ankyrin repeat
SMARTSM00015100762784IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525403.19E-8763868IPR027417P-loop containing nucleoside triphosphate hydrolase
PROSITE profilePS500966.961763792IPR000048IQ motif, EF-hand binding site
SMARTSM000150.18820842IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.224822850IPR000048IQ motif, EF-hand binding site
PfamPF006120.0046823841IPR000048IQ motif, EF-hand binding site
SMARTSM000154.2E-4843865IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.359844869IPR000048IQ motif, EF-hand binding site
PfamPF006123.0E-5846865IPR000048IQ motif, EF-hand binding site
SMARTSM002482200888917IPR002110Ankyrin repeat
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 979 aa     Download sequence    Send to blast
MASGYEYDIN DLYQEAQRRW LKPAEVMYIL QNHEKYQFTQ EPPQQPTSGS LFLFNRRVLR  60
FFRRDGHAWR KKRDGRAVGE AHERLKVGNV EALNCYYAHG EQIPTFQRRS YWMLDPAFDH  120
IVLVHYRDTS EGRLSSGPGT QLSPGSSSAF SQSPSSYSNQ NPGSTSIVDD SYERNQSFSS  180
PGSAEVTSDI FILNNGMAHL EGADAESGTS TELKITQALR RLEVQLSLNE DNFEEIAPFS  240
NEDEATRDSK PQNHQGVICK QEKSEALSGP DDQGQFCDGY NARQVVFVGD SGQSYREFLD  300
HDFPDGNEKV LSWTELKKLN KFSSVASPQK NVYMPAGNSF LAYLGVPSTS DAPHMLPAVF  360
SLPQDVGGVT LPPYSSMVET REIHSGYYAT LFDQSQIGAS LEAGSSLTVS QKQKFTIKAV  420
SPEWGYASET TKVFIIGSFL CHPSDSAWAC MLGDVEVPVE MIQDGVMCCE VPSHIPGKVT  480
LCITSGNRES CSEVREFEYR DKTKSCTHCT PSETEATRTP EELLLLVRFG QMLLSASSVS  540
NDNNNESGII IKQKADDDSW SHIIEALLFG SGTSFGTINW LLEELLKDKL QLWLTCRPWE  600
ADEETGCSLT KKEQGIIHMV AGLGFEWALN PILSCGVNIN FRDINGWTAL HWAARFGREK  660
MVASLIASGA SAGAVTDPSA QDPIGKTAAA IASSSGHKGL AGYLSEVALT SHLSSLKLEE  720
SELSKSSAEL QADLTVSNVS KENIASSEDP TSLKDTLAAI RNTTQAAARI QAAFRTHSFR  780
KRRANEAVAG MSRHDISASS IGNMPELSAM SKLAFRNPRE FNSAALSIQK KYRGWKSRRD  840
FLSLRQKVVK IQAHVRGYQV RKHYKVLWAV GILDKVVLRW RRKRSGLRGF RPEMETNENQ  900
DEDILKVFRK QKVDVEIEEA VSRVLSMVKS PDARQQYHRM LEKFRQAKAE LLASTSEEKL  960
LSTSVEDYLN MEDDYYQYP
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012572322.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012572322.10.0calmodulin-binding transcription activator 4 isoform X5
SwissprotQ9FYG20.0CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBLA0A1S3E9250.0A0A1S3E925_CICAR; calmodulin-binding transcription activator 4 isoform X5
STRINGXP_004504403.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.10.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]