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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_012571078.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | bZIP | ||||||||
Protein Properties | Length: 143aa MW: 16344.5 Da PI: 8.9343 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 24.1 | 8.1e-08 | 66 | 108 | 8 | 50 |
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +r+ N+eA +++R++Kkae++ Lee+vk+L N++L +l+ XP_012571078.1 66 KRASGNKEAVKKYREKKKAETAYLEEEVKKLRLVNQQLVRKLQ 108 67888*********************************98886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.0028 | 62 | 126 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 8.4E-11 | 65 | 127 | No hit | No description |
Pfam | PF07716 | 3.0E-9 | 66 | 108 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14686 | 8.89E-6 | 71 | 108 | No hit | No description |
SuperFamily | SSF57959 | 1.0E-5 | 71 | 125 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence Send to blast |
MDDGNSDESS SKLSDNVLFP NQESCSNFQA SKTCTHTHTC NTLDAIHTHT CYHTHTQLFD 60 TNSMPKRASG NKEAVKKYRE KKKAETAYLE EEVKKLRLVN QQLVRKLQGK QLLEAELLRL 120 RKILAQVKGK IDSEKLPTLH PHE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in the regulation of salt stress response. Functions as a negative transcriptional regulator of salt stress acclimation response by regulating cation homeostasis (PubMed:18703123, PubMed:19248824). Regulates negatively the expression of genes contributing to ion and osmotic homeostasis during salt stress, such as the Na(+) transporter HKT1, the Na(+)/H(+) antiporter SOS1, the aquaporin PIP2-1 and the glutamine synthetase GLN1-3. In addition, targets genes with functions in plant growth and development, such as argonaute 4 (AGO4) and cyclophilin 19 (CYP19) (PubMed:19248824). {ECO:0000269|PubMed:18703123, ECO:0000269|PubMed:19248824}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_012571078.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by salt stress (PubMed:18703123, PubMed:19248824). Induced by osmotic stress (PubMed:19248824). {ECO:0000269|PubMed:18703123, ECO:0000269|PubMed:19248824}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004499761.1 | 1e-103 | basic leucine zipper 24 | ||||
Refseq | XP_004499762.1 | 1e-103 | basic leucine zipper 24 | ||||
Refseq | XP_012571078.1 | 1e-103 | basic leucine zipper 24 | ||||
Refseq | XP_012571079.1 | 1e-103 | basic leucine zipper 24 | ||||
Swissprot | Q8GTS1 | 2e-32 | BZP24_ARATH; Basic leucine zipper 24 | ||||
TrEMBL | A0A1S2Y5R0 | 1e-101 | A0A1S2Y5R0_CICAR; basic leucine zipper 24 | ||||
STRING | XP_004499761.1 | 1e-102 | (Cicer arietinum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G51960.1 | 1e-22 | basic leucine zipper 24 |