PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012570696.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bZIP
Protein Properties Length: 387aa    MW: 43220.7 Da    PI: 8.0087
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012570696.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1315.5e-10100136339
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 
                     + k  rr+++NReAAr+sR+RKka++++Le    +++
  XP_012570696.1 100 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKFT 136
                     568899************************8544444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.3E-894144No hitNo description
SMARTSM003382.4E-798161IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.036100144IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.84E-7102144No hitNo description
PfamPF001704.8E-7102140IPR004827Basic-leucine zipper domain
CDDcd147089.04E-21102154No hitNo description
PROSITE patternPS000360105120IPR004827Basic-leucine zipper domain
PfamPF141447.9E-31184259IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MLGMTHSDKW ACCSSGGRSL LWCASELQSL QVRKAQSSNL VTILIGNTEN QEEFAMAEGS  60
PITDISTDGD TDDKNQRFDR SRSLAAMASD SGDRSKNKSD QKTLRRLAQN REAARKSRLR  120
KKAYVQQLES SRLKFTQLEQ ELQRARQQGI FISSSGDQAH SMSGNGAMAF DVEYARWLEE  180
QNRQINELRG AVNSHASETE LHMIMDGILA HYDEIFRLKG IAAKADVFHL LSGMWKTPAE  240
RCFLWLGGFR SSELLKLLIN QLEPLTDQQL VGITNLQQSS QEAEDALSQG MEALQQSLSE  300
TLTTGPLGSS SSSGNVANYM GQMAMAMGKL GTLEGFIRQA DNLRQQTLQQ IHRILTTRQS  360
ARALLAIHDY FSRLRALSSL WLARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012570696.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0933150.0BT093315.1 Soybean clone JCVI-FLGm-24E7 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004498677.10.0transcription factor TGA2.2 isoform X2
RefseqXP_012570693.10.0transcription factor TGA2.2 isoform X2
SwissprotQ6IVC20.0TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLA0A1S3E5J40.0A0A1S3E5J4_CICAR; transcription factor TGA2.2 isoform X2
STRINGXP_004498676.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.51e-149TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]