PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012570695.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bZIP
Protein Properties Length: 389aa    MW: 43548.8 Da    PI: 6.6819
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012570695.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1315.6e-10102138339
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 
                     + k  rr+++NReAAr+sR+RKka++++Le    +++
  XP_012570695.1 102 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKFT 138
                     568899************************8544444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.3E-896146No hitNo description
SMARTSM003382.4E-7100163IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.036102146IPR004827Basic-leucine zipper domain
PfamPF001704.8E-7104142IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.84E-7104146No hitNo description
CDDcd147084.32E-21104156No hitNo description
PROSITE patternPS000360107122IPR004827Basic-leucine zipper domain
PfamPF141447.9E-31186261IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
MRREQQEGCR ASIHNCHIPM QEGGTVDSFH VSDFDQSVGY CLEDAVGLTG KNQEEFAMAE  60
GSPITDISTD GDTDDKNQRF DRSRSLAAMA SDSGDRSKNK SDQKTLRRLA QNREAARKSR  120
LRKKAYVQQL ESSRLKFTQL EQELQRARQQ GIFISSSGDQ AHSMSGNGAM AFDVEYARWL  180
EEQNRQINEL RGAVNSHASE TELHMIMDGI LAHYDEIFRL KGIAAKADVF HLLSGMWKTP  240
AERCFLWLGG FRSSELLKLL INQLEPLTDQ QLVGITNLQQ SSQEAEDALS QGMEALQQSL  300
SETLTTGPLG SSSSSGNVAN YMGQMAMAMG KLGTLEGFIR QADNLRQQTL QQIHRILTTR  360
QSARALLAIH DYFSRLRALS SLWLARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012570695.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0933150.0BT093315.1 Soybean clone JCVI-FLGm-24E7 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012570695.10.0transcription factor TGA2.2 isoform X4
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A1S3E4K70.0A0A1S3E4K7_CICAR; transcription factor TGA2.2 isoform X4
STRINGXP_004498676.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.51e-149TGACG motif-binding factor 6