PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012570694.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bZIP
Protein Properties Length: 423aa    MW: 46824.5 Da    PI: 6.3282
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012570694.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.86.2e-10136171338
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 
                     + k  rr+++NReAAr+sR+RKka++++Le    ++
  XP_012570694.1 136 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKF 171
                     568899************************854444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.3E-8130180No hitNo description
SMARTSM003382.4E-7134197IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.036136180IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.04E-6138180No hitNo description
PfamPF001705.4E-7138176IPR004827Basic-leucine zipper domain
CDDcd147081.29E-21138190No hitNo description
PROSITE patternPS000360141156IPR004827Basic-leucine zipper domain
PfamPF141449.1E-31220295IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    Send to blast
MIFSYTEGGT VDSFHVSDFD QSVGYCLEDA VGLTGMISGR VARAGGEASC GALQSPLTND  60
TQLQSLQVRK AQSSNLVTIL IGNTENQEEF AMAEGSPITD ISTDGDTDDK NQRFDRSRSL  120
AAMASDSGDR SKNKSDQKTL RRLAQNREAA RKSRLRKKAY VQQLESSRLK FTQLEQELQR  180
ARQQGIFISS SGDQAHSMSG NGAMAFDVEY ARWLEEQNRQ INELRGAVNS HASETELHMI  240
MDGILAHYDE IFRLKGIAAK ADVFHLLSGM WKTPAERCFL WLGGFRSSEL LKLLINQLEP  300
LTDQQLVGIT NLQQSSQEAE DALSQGMEAL QQSLSETLTT GPLGSSSSSG NVANYMGQMA  360
MAMGKLGTLE GFIRQADNLR QQTLQQIHRI LTTRQSARAL LAIHDYFSRL RALSSLWLAR  420
PRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012570694.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0933150.0BT093315.1 Soybean clone JCVI-FLGm-24E7 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027189523.10.0transcription factor TGA2.2 isoform X3
SwissprotQ6IVC20.0TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLA0A3Q7XQ840.0A0A3Q7XQ84_CICAR; transcription factor TGA2.2 isoform X3
STRINGXP_004498676.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.51e-149TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]