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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_012570693.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | bZIP | ||||||||
Protein Properties | Length: 433aa MW: 47861.5 Da PI: 6.1265 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.8 | 6.4e-10 | 146 | 181 | 3 | 38 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 + k rr+++NReAAr+sR+RKka++++Le ++ XP_012570693.1 146 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKF 181 568899************************854444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 8.6E-8 | 140 | 190 | No hit | No description |
SMART | SM00338 | 2.4E-7 | 144 | 207 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.036 | 146 | 190 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 1.18E-21 | 148 | 200 | No hit | No description |
SuperFamily | SSF57959 | 1.04E-6 | 148 | 190 | No hit | No description |
Pfam | PF00170 | 5.5E-7 | 148 | 186 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 151 | 166 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 9.4E-31 | 230 | 305 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 433 aa Download sequence Send to blast |
MSSFDSQLPY SNASYTEGGT VDSFHVSDFD QSVGYCLEDA VGLTGMISGR VARAGGEASC 60 GALQSPLTND TQLQSLQVRK AQSSNLVTIL IGNTENQEEF AMAEGSPITD ISTDGDTDDK 120 NQRFDRSRSL AAMASDSGDR SKNKSDQKTL RRLAQNREAA RKSRLRKKAY VQQLESSRLK 180 FTQLEQELQR ARQQGIFISS SGDQAHSMSG NGAMAFDVEY ARWLEEQNRQ INELRGAVNS 240 HASETELHMI MDGILAHYDE IFRLKGIAAK ADVFHLLSGM WKTPAERCFL WLGGFRSSEL 300 LKLLINQLEP LTDQQLVGIT NLQQSSQEAE DALSQGMEAL QQSLSETLTT GPLGSSSSSG 360 NVANYMGQMA MAMGKLGTLE GFIRQADNLR QQTLQQIHRI LTTRQSARAL LAIHDYFSRL 420 RALSSLWLAR PRE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_012570693.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT093315 | 0.0 | BT093315.1 Soybean clone JCVI-FLGm-24E7 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004498677.1 | 0.0 | transcription factor TGA2.2 isoform X2 | ||||
Refseq | XP_012570693.1 | 0.0 | transcription factor TGA2.2 isoform X2 | ||||
Swissprot | Q6IVC2 | 0.0 | TGAL1_ORYSJ; Transcription factor TGAL1 | ||||
TrEMBL | A0A1S3E5J4 | 0.0 | A0A1S3E5J4_CICAR; transcription factor TGA2.2 isoform X2 | ||||
STRING | XP_004498676.1 | 0.0 | (Cicer arietinum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12250.5 | 1e-149 | TGACG motif-binding factor 6 |
Publications ? help Back to Top | |||
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