PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012568311.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 233aa    MW: 27020.3 Da    PI: 7.4641
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012568311.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY39.89.1e-132076259
                    --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                    +Dgy+W+   ++   +++fp+ YY C  ++C+vkk+v r++ ++++ +  ++++Hnh+
  XP_012568311.1 20 EDGYKWKMHRKRLTIDNKFPKTYYTCINPDCSVKKRVYRNS-QEEINVEYNQENHNHQ 76
                    7***************************************9.445555556789***7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081113.7241478IPR003657WRKY domain
SuperFamilySSF1182905.89E-111678IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.6E-111778IPR003657WRKY domain
SMARTSM007741.8E-41977IPR003657WRKY domain
PfamPF031063.2E-82076IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.1E-4113151IPR003657WRKY domain
SuperFamilySSF1182908.24E-5113151IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MANSSDQDSN SLNIYYTLDE DGYKWKMHRK RLTIDNKFPK TYYTCINPDC SVKKRVYRNS  60
QEEINVEYNQ ENHNHQPPDP NPTITELLDT RTGEVIYKDI QGHKWTCHRR NCNINGTGLS  120
RAYYNCIYPN CDVKKFVVGD KITINGPHNH RPLNLNIQEN ILSESTEPKL QNLVEINSGA  180
DVGPQPKRMR STQITTSEPC PYLKDIEENL ARSPKVVNEV KLSEYIAEFQ KLL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012568311.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027187428.11e-153probable WRKY transcription factor 4
TrEMBLA0A3Q7XLE11e-152A0A3Q7XLE1_CICAR; probable WRKY transcription factor 4
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.11e-11WRKY DNA-binding protein 2