PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012567720.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 234aa    MW: 26347.6 Da    PI: 9.833
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012567720.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY28.82.5e-09214233221
                     --SS-EEEEEEE--TT-SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefp 21 
                     +D ++WrKYGqK++kgs++p
  XP_012567720.1 214 EDPWAWRKYGQKPIKGSPYP 233
                     899***************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.9E-8202233IPR003657WRKY domain
SuperFamilySSF1182903.79E-7207233IPR003657WRKY domain
PROSITE profilePS5081113.104208234IPR003657WRKY domain
PfamPF031069.4E-5214233IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MDNDGWDLSA IVRSCKATTF TNPTTVFETP TPNTSTNNAR SPLKPTDFIE LEKLTTIINP  60
NTTISTPTST STSTSTSASA ANILKPTFTI GTPAFTYTSV HNTNQNSTFY DVSTLGIQQE  120
MQLNPQTDLF TRVYIPTKVN CIKVTSAHFD LAYNHPSLQQ QSQRELNQLP IQVTQINSVV  180
LPNTRPQRKK YRSKYRKNQQ MNLVCHVNTE KLLEDPWAWR KYGQKPIKGS PYPS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012567720.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012567720.11e-172probable WRKY transcription factor 27
TrEMBLA0A1S3DW921e-171A0A1S3DW92_CICAR; probable WRKY transcription factor 27
STRINGXP_004503056.11e-117(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.14e-15WRKY DNA-binding protein 27