PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012567586.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family G2-like
Protein Properties Length: 181aa    MW: 21247.4 Da    PI: 9.2862
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012567586.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like75.38e-24118167252
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 
                      r  Wt++LH++Fv +v++L G e+A Pk+il++m+v+gLt+ehv+SHLQk
  XP_012567586.1 118 FRWSWTQQLHNQFVTVVNEL-GLENAKPKKILKIMDVPGLTREHVASHLQK 167
                     5899****************.9****************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23009.3E-63992No hitNo description
SuperFamilySSF521725.45E-54087IPR011006CheY-like superfamily
SuperFamilySSF466892.51E-16115172IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-23116170IPR009057Homeodomain-like
TIGRFAMsTIGR015575.2E-20118171IPR006447Myb domain, plants
PfamPF002491.0E-6121167IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MALTILPERF PIGLRVLALD VDTTHHPILH AMGNRFQYQV MSSHYSTNSV MEAITKGASD  60
YWIKPLEERH FQTMWKHVVK DIFHMNNKRG REQVDVPKQT IDENHNHNDD YPSPPKKFRW  120
SWTQQLHNQF VTVVNELGLE NAKPKKILKI MDVPGLTREH VASHLQKIYL RYSLELVDSN  180
I
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5lxu_A4e-14119171357Transcription factor LUX
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_012567586.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012567586.11e-134two-component response regulator ARR10-like isoform X3
TrEMBLA0A1S3DXK81e-133A0A1S3DXK8_CICAR; two-component response regulator ARR10-like isoform X3
STRINGXP_004516378.11e-122(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31920.11e-25response regulator 10