PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011402302.1
Organism
Auxenochlorella protothecoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella
Family ERF
Protein Properties Length: 268aa    MW: 29969.4 Da    PI: 9.3308
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011402302.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.23.1e-11150194150
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50 
                     s+++GV++   ++rW+A+ r    ng  k  slg f+ +eeAa+a+++++
  XP_011402302.1 150 SKFRGVHQTFPTKRWEAQFRR---NG--KPTSLGCFDAEEEAARAYDKMM 194
                     79****************555...54..*******************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.4E-7150195IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-9150197IPR016177DNA-binding domain
PROSITE profilePS5103211.509151213IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.0E-8151202IPR001471AP2/ERF domain
SMARTSM003801.2E-4151219IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MAAAIEQFQK SETSPTGRPS GDAEHNVSRF DTAELMARVR ALAQFPEELP AIYSRAKPSS  60
ASLQAVYGWQ DLRRRRELEL LSAYGGSAMQ PSTFVPTTQL PLVHSPSTLH SNDAIERPTT  120
SLPRQVSGML GKTSKHHKAK GNSNGRTYTS KFRGVHQTFP TKRWEAQFRR NGKPTSLGCF  180
DAEEEAARAY DKMMLWCELH HATGVKGGIT NFDHSDYEQD VSWLLNITQD DLVQLLRSDG  240
RQQAQRRTMR QKRDQVLYSG AGASGDDD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011402302.10.0AP2-like ethylene-responsive transcription factor SNZ
TrEMBLA0A087SU450.0A0A087SU45_AUXPR; AP2-like ethylene-responsive transcription factor SNZ
STRINGA0A087SU450.0(Auxenochlorella protothecoides)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP27461414
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G39250.15e-09AP2 family protein