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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | XP_011401513.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella
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| Family | bZIP | ||||||||
| Protein Properties | Length: 455aa MW: 47348.6 Da PI: 6.3587 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 24.9 | 4.5e-08 | 112 | 161 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54
k + +kNR A+rr+R+R k++++eLee v++L+ + ++ e l
XP_011401513.1 112 KQTALQEKNRRAQRRFRERQKMKVAELEEQVATLTLQLDRVTGERAALAS 161
5666789***************************8665554444444444 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SMART | SM00338 | 0.0058 | 107 | 172 | IPR004827 | Basic-leucine zipper domain |
| Gene3D | G3DSA:1.20.5.170 | 1.1E-6 | 114 | 168 | No hit | No description |
| SuperFamily | SSF57959 | 2.01E-6 | 117 | 167 | No hit | No description |
| Pfam | PF07716 | 1.6E-4 | 118 | 151 | IPR004827 | Basic-leucine zipper domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
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| Protein Sequence Length: 455 aa Download sequence Send to blast |
MNQDFVEGGA PPPLAPDPLE LTGMAWDLDV EAFLDDYLKD VDAGPPDPFG TYPASLPIPT 60 QEPGVKSEAD PSSSEGLSDR LAKQTLDPQS GADCRGTPSP PPRAGKAQGV RKQTALQEKN 120 RRAQRRFRER QKMKVAELEE QVATLTLQLD RVTGERAALA SHASRLEAAL AAATAREEAA 180 AGDLRLTLRE GQSQSLTAEE LRGMTPAELA RYYKAYVNEL AQSLRASLAG LRALFQGKLA 240 GIRARRRGVV EALARAEPVG TGTRPLAALY LASHEAARGL REALREEHIL VLDFESTVFK 300 HVLSGLQVAQ LMIHSFPWTP DCLALCTWVA AEAGDADALG ALAAEAQRKA AAAAPHPGGG 360 VGPAGPFASP FLADSGVNAG ALAAQQHALA PLALAPRSAS GLSLPSPPHS MPGPGSSGTQ 420 HNGLCGPGMP FVSIGFGGMG SGGPAPGMLP VHTAS |
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_011401513.1 | 0.0 | hypothetical protein F751_5721 | ||||
| TrEMBL | A0A087SRZ0 | 0.0 | A0A087SRZ0_AUXPR; Uncharacterized protein | ||||
| STRING | A0A087SRZ0 | 0.0 | (Auxenochlorella protothecoides) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Chlorophytae | OGCP3867 | 4 | 4 |
| Link Out ? help Back to Top | |
|---|---|
| Entrez Gene | 23617112 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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