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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_011400834.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella
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Family |
SBP |
Protein Properties |
Length: 611aa MW: 63065.6 Da PI: 7.6782 |
Description |
SBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_011400834.1 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SBP | 89.9 | 2.7e-28 | 81 | 156 | 1 | 76 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS
SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76
+Cq++gC++ l+++ yh+r ++Ce h kap+ l +g+ rfCq+C+ h l efD +++sCr++L+khn+rrrk+
XP_011400834.1 81 VCQADGCHKPLANLTFYHQRNRICEEHIKAPSFLKDGELLRFCQRCGVSHPLAEFDGQRKSCRKQLEKHNARRRKS 156
6*************************************************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 611 aa
Download sequence Send
to blast |
MADDVPPPGL PERLSGATAW DPADWAWDSV RMVATPIATP VTKPCCATAS APRVQRQPAR 60 RPGRPSRPAP APARKPVREN VCQADGCHKP LANLTFYHQR NRICEEHIKA PSFLKDGELL 120 RFCQRCGVSH PLAEFDGQRK SCRKQLEKHN ARRRKSGASP SAPIGTPTMP ASGSDNGGCL 180 PGSSGAPTKI MPEQAWAGLD LANPSSGWGW APGTSTPPPS SSSLSQPWLA GGESCASLSE 240 SRSDGACTGS APDALVEELS GWLTQQLADS PLFGATPEQL PPDLADQLAA WCAPPGSGLA 300 SLEAYLRPGC LHLTVQAVVQ GTPRCDEDAL GAVLAAMTGR TVHLDIPAPT LPGLLHVDVQ 360 KGPYLAPPGR GSRCLVVDSP AVAAELTAWV STAAVQGDAQ CMLDALGLVY EHVGGRGKIV 420 LGWGLWNSSP ASSSLPGPRD GTDRHGKPSP VPLSVYHLAA AAGEESTAER LVEALLEGGV 480 RPPAASQLPP GHRASDFAAR RGHHALAARL RALEGEAEGR HALPPSPKLH PAPHRATCCA 540 LGPVGAVPAE PALALGSFAR AGSGEPVAPD TPKRCCCKGS CPCALRTCGS CCSGGGLGCG 600 LRSGDCPCCS G
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 569 | 574 | DTPKRC |
2 | 570 | 574 | TPKRC |