PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011399892.1
Organism
Auxenochlorella protothecoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella
Family G2-like
Protein Properties Length: 943aa    MW: 102565 Da    PI: 6.3955
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011399892.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like833.2e-26845899155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +prl Wt  LH+rF+ea+e +GG +kA Pk+i++ m+v gLt+e+v+SHLQkYR+
  XP_011399892.1 845 RPRLIWTDALHRRFLEALETIGGVDKAPPKAIMKEMGVTGLTRENVASHLQKYRM 899
                     59****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.63842902IPR017930Myb domain
SuperFamilySSF466894.3E-17843903IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.0E-25844903IPR009057Homeodomain-like
TIGRFAMsTIGR015571.8E-22846900IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009733Biological Processresponse to auxin
GO:0010082Biological Processregulation of root meristem growth
GO:0010366Biological Processnegative regulation of ethylene biosynthetic process
GO:0019827Biological Processstem cell population maintenance
GO:0045087Biological Processinnate immune response
GO:0055070Biological Processcopper ion homeostasis
GO:0005634Cellular Componentnucleus
GO:0005768Cellular Componentendosome
GO:0005802Cellular Componenttrans-Golgi network
GO:0003677Molecular FunctionDNA binding
GO:0008476Molecular Functionprotein-tyrosine sulfotransferase activity
Sequence ? help Back to Top
Protein Sequence    Length: 943 aa     Download sequence    Send to blast
MRPVLLLVML TAAQAVICRA SLETNPSDEQ CAAWIAAYRA DHPVLDKQAL NGTRPSQVYF  60
MHIPRTGGKT CFSCFLKSAV PPSQRCLKAY DGPRLALSSP SCGLISSHDD YSLVDSLQPG  120
VAVVTQLRDP TSRVISAYEF AVSVAAESLG AGGEGPSLQA PEHLNYVNTM EVWPWSILIP  180
WFRRNMQARL EGLRKEATRD GTTTWLKFKT RKGQVYWWNR STNATSLTAP TPMATLEPYS  240
NPLVMPLAEW IEHPIARELV HEGATLQLLG ISNVSRWGGE ATRLRRCFHA HAPARAELAA  300
LAARRLDGLA GAGTLEQLHA SVEAHADALG ISLEGPAYRN PDEWTWSFDP VEGADLDARL  360
TVRFPARAGV SAPSAPSTMT LREARRHLMS LHESLIAARE AQALLQPRLA YILKAEEEWL  420
GVAPGRTLAA SPLGQEIAAL DAVLAKKQEE VERLTARLEA LRAAGVIASL AEAQGPSVQV  480
VPDRHFLLPE PLGPAFVRCA RGPAYRNPDE WTWSFDPVEG ADLDARLTVR FPARAGVSAP  540
SAPSTMTLRE ARRHLMSLHE SLIAAREAQA LLQPRLAYIL KAEEEWLGVA PGRTLAASPL  600
GQEIAALDAV LAKKQEEVER LTARLEALRA AGVIASLAEA QGPSVQVVPD RHFLLPEPLG  660
PAFVRCARRQ HGGQGPRDRP GFPPASQAGY GQQQAPQRAP APWGSGEDTG PSDYAPMPPP  720
GYMPASRPGA YPMSLQQQQQ QAAYASQQYQ QAAAYQQAGQ QMKQYEMQYT PDWVNPYQQY  780
PYSFSGQFAG YMPYPVMPPG SDPVQEGPPP ESMAPPSAQA PQTGAADPPS ADEAEEEEEA  840
RAVKRPRLIW TDALHRRFLE ALETIGGVDK APPKAIMKEM GVTGLTRENV ASHLQKYRMR  900
LKRGEEVEGQ GMNSPLQGSW YECALTPQAP SEAADAAQGP GEP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5lxu_A1e-15845902157Transcription factor LUX
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011399892.10.0Protein-tyrosine sulfotransferase
TrEMBLA0A087SMI20.0A0A087SMI2_AUXPR; Protein-tyrosine sulfotransferase
STRINGA0A087SMI20.0(Auxenochlorella protothecoides)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05090.12e-18G2-like family protein