PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011399733.1
Organism
Auxenochlorella protothecoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella
Family bZIP
Protein Properties Length: 379aa    MW: 37618 Da    PI: 5.1405
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011399733.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_156.17.9e-18212273162
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                     e+elkr rrkq+NR +ArrsR+RK+ae+eeL ++vk L aeN +L+ e   l+ +++ l+++
  XP_011399733.1 212 ERELKRLRRKQSNRDSARRSRLRKQAECEELGKRVKDLIAENGELRAERIALRAQIEVLDAK 273
                     89**********************************************99999999988876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.2E-14211274No hitNo description
PfamPF001702.4E-15212270IPR004827Basic-leucine zipper domain
SMARTSM003383.3E-15212276IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.484214277IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-10215271No hitNo description
CDDcd147022.14E-18217266No hitNo description
PROSITE patternPS000360219234IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MYPNAMMYNP ALSGMNPYTA AFMASMAEGA DPAKATLTST TAEAKDDAAA AAAAPAGPGE  60
GGSAEEGSRK READASEAAD APSKRAALAP GQAGDSAAAL PPGVKTGSQA ALSLLASAAA  120
TGKPGSKVPG LAALPGLAGL NMPPMPPGAM GLVPGAAAGA AVAATSPGAQ HLAEVWNALN  180
GQFSQSPTLP ELKRAGSAEA LEAELAAAAG DERELKRLRR KQSNRDSARR SRLRKQAECE  240
ELGKRVKDLI AENGELRAER IALRAQIEVL DAKLAMSSAF NLALGAGELE KIQADARAKQ  300
AAEATNVAAA IAHVNALTAN SNAADQEDEE GEDRGRGGPP SVPTPASGPQ LPPAAAASGA  360
QAQGHAAAAG ALGPQSTSA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1228234RRSRLRK
2228235RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00173DAPTransfer from AT1G32150Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011399733.10.0G-box-binding factor 1
TrEMBLA0A087SM310.0A0A087SM31_AUXPR; G-box-binding factor 1
STRINGA0A087SM310.0(Auxenochlorella protothecoides)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP4426911
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32150.13e-19basic region/leucine zipper transcription factor 68