PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantTFDB

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

XP_011397660.1

Organism

Auxenochlorella protothecoides

Taxonomic ID

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella

Family

Protein Properties

Length: 243aa MW: 26359.9 Da PI: 4.7752

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011397660.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.4	1.1e-11	161	208	3	50
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 + ++er kq+ Re+A rsR R+k +++ Lee+ ++L aeN aL+ +l+ XP_011397660.1 161 AAQVERTKQRRRESAHRSRSRRKDYMKTLEEENDALRAENAALRAKLK 208 57899***************************************7775 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF00170	5.3E-8	161	208	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.036	161	208	IPR004827	Basic-leucine zipper domain
SMART	SM00338	0.0092	162	227	IPR004827	Basic-leucine zipper domain
CDD	cd14686	4.69E-10	165	208	No hit	No description
Gene3D	G3DSA:1.20.5.170	4.8E-9	165	208	No hit	No description
SuperFamily	SSF57959	5.69E-7	165	209	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence Send to blast
MCRVILRPQA REQRGVAPSA VAGNFADLLT GFDPASLLEA KQEPLSPDSE LLETAEGFEL 60 QDTDADLLAM FQELAEEPAP ELAPLAMPTS PAASLPGPMV PFEPVQTLPV PARPAMTIFD 120 QQLMFQQAML QQQQAAMATA QIPVKPGYPT LRRGKTPEEV AAQVERTKQR RRESAHRSRS 180 RRKDYMKTLE EENDALRAEN AALRAKLKVQ GVSLTSSVMD AASRQTSGGA DSGSSSEVAA 240 MQM

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011397660.1	1e-173	hypothetical protein F751_3784
TrEMBL	A0A087SGB8	1e-172	A0A087SGB8_AUXPR; Uncharacterized protein
STRING	A0A087SGB8	1e-173	(Auxenochlorella protothecoides)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP6903	4	4

Link Out ? help Back to Top
Entrez Gene	23615175