PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011101543.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family NAC
Protein Properties Length: 547aa    MW: 60889 Da    PI: 4.5377
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011101543.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM170.65.1e-53201512128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                      pGfrFhPtdeelv++yL++kv gk l+l ++i+e+d+yk+ePwdLp        k+k+++ ewyfFs  dkky +g r+nrat++gyWk+tgkd
  XP_011101543.1  20 GPGFRFHPTDEELVQYYLRRKVCGKALRL-DAISEIDVYKAEPWDLPLwftvdmsKLKTRDLEWYFFSALDKKYGNGARTNRATEKGYWKTTGKD 113
                     59***************************.99***************557898777777888********************************* PP

             NAM  90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++v++ k++ vg+kktLv+++grapkg++t+Wvmheyrl
  XP_011101543.1 114 RAVYH-KTQIVGMKKTLVYHSGRAPKGQRTNWVMHEYRL 151
                     *****.999****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-5914174IPR003441NAC domain
PROSITE profilePS5100555.85819174IPR003441NAC domain
PfamPF023652.5E-2821151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    Send to blast
MGMESETGKK KSSVSSSVLG PGFRFHPTDE ELVQYYLRRK VCGKALRLDA ISEIDVYKAE  60
PWDLPLWFTV DMSKLKTRDL EWYFFSALDK KYGNGARTNR ATEKGYWKTT GKDRAVYHKT  120
QIVGMKKTLV YHSGRAPKGQ RTNWVMHEYR LADLGLEASG IAQDAFVLCR VFQKSGSGSK  180
NGEQYGAPFV EEDWDVDGEL ELVPADEAKD KFDFADDTWL DSRDLHQILA SDVPSDSAPL  240
LVNFQHADCS YIEETTVSTN DTQKLLGCNN LPASCETDVT PDKQYIGECG KSSRSQNMDY  300
LLDEAFLDSS DNLQYGDGGF IETNDLSNPI ETDSAAFDML EEYLTFFDAN DGNSLDFAYD  360
PALMLGSEDL VPDKAKLPHK GLCEGTEKAI LPMGKLMDDI NNDAASVFDE KQSENNQSDF  420
QYQFVRKASQ MLGNIPAPSA FAAEFPSKDA ILRLNSSTQS SSSVHVTSGM IQIRNLNTDG  480
AFAKHENLNI LLSFGLSRSD DGSSSLESSV RILPGKVASS ISKGWFYFMF FWVLILSVSF  540
KIATYAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A4e-461918020174NAC domain-containing protein 19
3swm_B4e-461918020174NAC domain-containing protein 19
3swm_C4e-461918020174NAC domain-containing protein 19
3swm_D4e-461918020174NAC domain-containing protein 19
3swp_A4e-461918020174NAC domain-containing protein 19
3swp_B4e-461918020174NAC domain-containing protein 19
3swp_C4e-461918020174NAC domain-containing protein 19
3swp_D4e-461918020174NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011101543.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101543.10.0NAC domain-containing protein 53 isoform X1
TrEMBLA0A2G9I3Z20.0A0A2G9I3Z2_9LAMI; Uncharacterized protein
STRINGMigut.F01687.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31412450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.11e-121NAC domain containing protein 53