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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011101193.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | bHLH | ||||||||
Protein Properties | Length: 206aa MW: 23438.8 Da PI: 10.4876 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.4 | 4.1e-11 | 39 | 90 | 2 | 54 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 + h e+Er+RR+++ + Lr+llP+ +++K s + ++A +YIk++ XP_011101193.1 39 KYVHRENERQRRQEMANLCGSLRTLLPPeY--ITKGKRSMPDLMQQAANYIKYM 90 667*************************66..79******************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 12.474 | 37 | 90 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.07E-11 | 38 | 107 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 6.4E-10 | 38 | 107 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 9.15E-6 | 38 | 95 | No hit | No description |
Pfam | PF00010 | 3.0E-8 | 39 | 90 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.6E-4 | 43 | 96 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence Send to blast |
MGAGVNPTTS TSNGRPRLRP APSRVHEEET NIGVINVRKY VHRENERQRR QEMANLCGSL 60 RTLLPPEYIT KGKRSMPDLM QQAANYIKYM RKNIQQLKTR KDELIMRKGV NSDNISRENL 120 PNNCVRVNPC PGGVEILIDT SFEDGQGFPL SRVLKELRQT GLDVVSCVST RANQKTLHRI 180 QSEARRTYSS EDLAALRERL SQLPIL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011101193.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011101193.2 | 1e-150 | transcription factor bHLH118-like | ||||
TrEMBL | A0A2G9H1D3 | 4e-66 | A0A2G9H1D3_9LAMI; Uncharacterized protein | ||||
STRING | XP_009587651.1 | 5e-39 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA598 | 24 | 109 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25400.1 | 2e-31 | bHLH family protein |