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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011099996.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | bHLH | ||||||||
Protein Properties | Length: 236aa MW: 25686.3 Da PI: 8.9107 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.4 | 1.1e-12 | 54 | 100 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h+e+ErrRR+riN +++L+++lP+ K +Ka+ L ++v+ +k+L XP_011099996.1 54 NSHKEAERRRRKRINGHIATLKSILPNT-----IKTDKASLLGETVRLVKEL 100 68*************************8.....69************99998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 14.945 | 51 | 100 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 9.1E-13 | 54 | 103 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.9E-10 | 54 | 100 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 4.97E-13 | 55 | 119 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.0E-10 | 57 | 106 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:3.30.70.260 | 3.9E-4 | 148 | 210 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence Send to blast |
MFSINQSLYE AGSCSDSYAI LQGMLSSSQA DTDQNPNLIS PSFMAEAKAA AASNSHKEAE 60 RRRRKRINGH IATLKSILPN TIKTDKASLL GETVRLVKEL KKTTSELTAI DAETNGELST 120 SLTLMFPSET DDLNVCHCEN SGLIRAAFSC DDRPEMIPEL IQALKSAEAK VVRAEMSTVG 180 GRTKSVVWVK LLTGESDAGL GRLRRELKKV VMEKSISLAG SGQGLPGNKR PRYYHL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011099996.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011099996.1 | 1e-175 | transcription factor bHLH30-like isoform X2 | ||||
Refseq | XP_020554626.1 | 1e-174 | transcription factor bHLH131-like isoform X1 | ||||
Refseq | XP_020554627.1 | 1e-175 | transcription factor bHLH30-like isoform X2 | ||||
TrEMBL | A0A2G9G238 | 2e-97 | A0A2G9G238_9LAMI; Uncharacterized protein | ||||
STRING | Migut.H02300.1.p | 3e-80 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA7283 | 22 | 31 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38070.1 | 2e-29 | bHLH family protein |