PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011098931.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | NAC | ||||||||
Protein Properties | Length: 240aa MW: 27576.1 Da PI: 9.0558 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 107 | 2.4e-33 | 10 | 136 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lp GfrFhPtd+el+ +yLk+k+ + +l+ + + ++vd+++++PwdLp + +++ yfF+k++ + ++ + + gyWk++gkdk+v++ XP_011098931.1 10 LPIGFRFHPTDQELLLHYLKRKLYSLPLPPTLIPDHVDVFHSNPWDLPGDL---KEKRYFFCKTKMNFMNKCSLM-SSDCGYWKSSGKDKQVMAP 100 699************************9996667788***********554...4578*****999887655544.4688**************9 PP NAM 96 ...kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ l+g+kk + f++g+++ kt+Wvmh++ l XP_011098931.1 101 gsgTNLLIGIKKCFLFHQGKTSPQLKTQWVMHQFCL 136 6544555*************9999**********87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.18E-41 | 6 | 165 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 41.382 | 10 | 165 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.7E-21 | 11 | 135 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence Send to blast |
METEQPLIKL PIGFRFHPTD QELLLHYLKR KLYSLPLPPT LIPDHVDVFH SNPWDLPGDL 60 KEKRYFFCKT KMNFMNKCSL MSSDCGYWKS SGKDKQVMAP GSGTNLLIGI KKCFLFHQGK 120 TSPQLKTQWV MHQFCLVASF TTPFFLAQKL MMQVGDWVVC RVYQRKRKAR NQVANYIKKP 180 RTLQGIRTKD HMNLRMGEEN ELGFSSAQTC CSSSCCSGIT EISCNELDEE ASSQASPCWK |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-27 | 8 | 166 | 13 | 169 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011098931.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011098931.1 | 0.0 | NAC domain-containing protein 41 | ||||
TrEMBL | A0A022QZ79 | 8e-86 | A0A022QZ79_ERYGU; Uncharacterized protein | ||||
STRING | Migut.F00031.1.p | 1e-86 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13250 | 13 | 18 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33480.1 | 3e-40 | NAC domain containing protein 41 |