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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_011098601.1 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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| Family |
HD-ZIP |
| Protein Properties |
Length: 281aa MW: 32202 Da PI: 6.5145 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_011098601.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56 | 6.6e-18 | 70 | 123 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k
XP_011098601.1 70 KKRRLNLEQVKALEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 123
4557899**********************************************9 PP
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| 2 | HD-ZIP_I/II | 129.3 | 1.5e-41 | 69 | 160 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
ekkrrl+ eqvk+LE+sFe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy++Lkr+++alk++n++L++++++L+++l
XP_011098601.1 69 EKKRRLNLEQVKALEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDMLKRQFEALKADNDALKSQNKKLQTQLL 160
69**************************************************************************************9985 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 281 aa
Download sequence Send
to blast |
MAFVPAESMF RNHEDSHFPS SSPCAPQDFH GVPEFLMRRS MSFSGMERPE DQLQPEDEMS 60
DDGSQLLGEK KRRLNLEQVK ALEKSFELGN KLEPERKMQL ARALGLQPRQ IAIWFQNRRA 120
RWKTKQLEKD YDMLKRQFEA LKADNDALKS QNKKLQTQLL ALKTRDSTGS GAINLNKENE 180
GSWSNVSENS CEVNLNTTST DSTLYPHPHH HQTNKNPVIN FPSAIGPSSL TQLLQRPDHH 240
LQLCQKMDHA PVSNDGFGNM FGAGIEENQD FWPWPEQQNF N
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| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 117 | 125 | RRARWKTKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| UniProt | Probable transcription factor that may act in the sucrose-signaling pathway. {ECO:0000269|PubMed:11292072}. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Ribone PA,Capella M,Chan RL
Functional characterization of the homeodomain leucine zipper I transcription factor AtHB13 reveals a crucial role in Arabidopsis development.
J. Exp. Bot., 2015. 66(19): p. 5929-43
[PMID:26136262] - Wang X, et al.
Overexpressed BRH1, a RING finger gene, alters rosette leaf shape in Arabidopsis thaliana.
Sci China Life Sci, 2018. 61(1): p. 79-87
[PMID:28887625] - Ebrahimian-Motlagh S, et al.
JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
Front Plant Sci, 2017. 8: p. 2118
[PMID:29326734]
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