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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_011098342.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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| Family |
NAC |
| Protein Properties |
Length: 316aa MW: 35229.4 Da PI: 7.1783 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_011098342.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 170.3 | 5.9e-53 | 14 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppGfrF Ptdeel+v+yL++kv+g++++l +vi +vd+yk++PwdLp+k+ +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk +++
XP_011098342.1 14 LPPGFRFYPTDEELLVQYLCRKVAGHHFPL-QVIGDVDLYKFDPWDLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITT- 106
79****************************.99***************8777899***********************************9999. PP
NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
+g++vg+kk Lvfy g+apkg+kt+W+mheyrl
XP_011098342.1 107 EGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 139
999****************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 316 aa
Download sequence Send
to blast |
MGVPETDPLS QLSLPPGFRF YPTDEELLVQ YLCRKVAGHH FPLQVIGDVD LYKFDPWDLP 60
SKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIITTEGRK VGIKKALVFY 120
VGKAPKGTKT NWIMHEYRLS ESPRKNGGNK LDDWVLCRIY KKNSGGGGGG QKPVVCSGQS 180
KEYSHGSPSQ SSCSSQHDDV LESFPEMNSL ENFEQEDQKL MNLQRLGSWN FDWATLAGLG 240
PIWAEEVQAQ HGQTRNGMYA PDAVMDDDVQ TGLVNNQRVH DSGFFPTGFG QGLSGSLDPF 300
GIRYPAQTTL GSGFRQ
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 3swm_A | 1e-104 | 1 | 166 | 7 | 172 | NAC domain-containing protein 19 |
| 3swm_B | 1e-104 | 1 | 166 | 7 | 172 | NAC domain-containing protein 19 |
| 3swm_C | 1e-104 | 1 | 166 | 7 | 172 | NAC domain-containing protein 19 |
| 3swm_D | 1e-104 | 1 | 166 | 7 | 172 | NAC domain-containing protein 19 |
| 3swp_A | 1e-104 | 1 | 166 | 7 | 172 | NAC domain-containing protein 19 |
| 3swp_B | 1e-104 | 1 | 166 | 7 | 172 | NAC domain-containing protein 19 |
| 3swp_C | 1e-104 | 1 | 166 | 7 | 172 | NAC domain-containing protein 19 |
| 3swp_D | 1e-104 | 1 | 166 | 7 | 172 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that acts downstream of MYC2 in the jasmonate-mediated response to Botrytis cinerea infection (PubMed:28733419). With MYC2 forms a transcription module that regulates wounding-responsive genes (PubMed:28733419). Involved in jasmonate- and coronatine-mediated stomatal reopening in response to Pseudomonas syringae pv tomato DC3000 infection (PubMed:25005917). Regulates the expression of threonine deaminase 2 (TD2) through promoter binding (PubMed:28733419). {ECO:0000269|PubMed:25005917, ECO:0000269|PubMed:28733419}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by jasmonate (JA) (PubMed:25005917, PubMed:28733419, PubMed:30610166). Induced by wounding (PubMed:28733419, PubMed:25005917). Induced by infection with the fungal pathogen Botrytis cinerea (PubMed:28733419). Induced by coronatine (PubMed:25005917). {ECO:0000269|PubMed:25005917, ECO:0000269|PubMed:28733419, ECO:0000269|PubMed:30610166}. |
