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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011097737.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | MYB | ||||||||
Protein Properties | Length: 186aa MW: 21326.9 Da PI: 7.3858 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.3 | 1.7e-08 | 15 | 61 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 +WT eE +++ d+ +++ + +W++Ia++++ ++++ ++ ++ + XP_011097737.1 15 KWTWEENKQFEDGLVEFPEDcpnRWERIAARLQ-TKSAPEVERHFAVL 61 8********************************.********999665 PP | |||||||
2 | Myb_DNA-binding | 50.6 | 4.3e-16 | 109 | 153 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + +++G+g+Wk+I+r+m ++R++ q+ s+ qky XP_011097737.1 109 PWTADEHRLFLLGLEKYGKGDWKSISRYMVLTRSPAQVASHAQKY 153 8*******************************************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 5.2E-4 | 9 | 62 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51293 | 7.517 | 11 | 64 | IPR017884 | SANT domain |
SMART | SM00717 | 1.9E-5 | 12 | 64 | IPR001005 | SANT/Myb domain |
SuperFamily | SSF46689 | 1.1E-10 | 14 | 69 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 5.0E-7 | 15 | 60 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 2.28E-5 | 15 | 62 | No hit | No description |
PROSITE profile | PS51294 | 17.984 | 102 | 158 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.24E-16 | 103 | 159 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 3.5E-10 | 103 | 161 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.5E-15 | 105 | 157 | IPR006447 | Myb domain, plants |
SMART | SM00717 | 1.1E-11 | 106 | 156 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 4.4E-13 | 109 | 153 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 1.16E-9 | 109 | 153 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence Send to blast |
MENASRCDSK VGNSKWTWEE NKQFEDGLVE FPEDCPNRWE RIAARLQTKS APEVERHFAV 60 LLDDVAAIEA GLIELPEYVE KVGFGSSEPQ QNPKSEKKPI VAQRKAARPW TADEHRLFLL 120 GLEKYGKGDW KSISRYMVLT RSPAQVASHA QKYYERQEKE EQNKKRRSIF DNSAAEGSSL 180 TSKFCC |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Involved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011097737.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011097737.1 | 1e-137 | transcription factor DIVARICATA-like | ||||
Swissprot | Q8S9H7 | 1e-44 | DIV_ANTMA; Transcription factor DIVARICATA | ||||
TrEMBL | A0A0K1SBI7 | 1e-104 | A0A0K1SBI7_REHGL; MYB-related protein | ||||
STRING | Migut.M01627.1.p | 3e-85 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA14988 | 6 | 9 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 1e-42 | MYB family protein |
Publications ? help Back to Top | |||
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