PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011097658.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | NAC | ||||||||
Protein Properties | Length: 261aa MW: 29319.3 Da PI: 8.5693 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 167.7 | 3.8e-52 | 6 | 136 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhP+deel+++yL k v+g++ + ++ + +vd++k+ePwd+p+++ + kewyf+s+rd+kyatg r+nrat sgyWkatgkd++v+ XP_011097658.1 6 LPPGFRFHPRDEELICDYLMKWVRGEQSNKSNSplLIQVDLNKCEPWDIPESACVGGKEWYFYSQRDRKYATGIRTNRATISGYWKATGKDRPVC 100 79************************955544335999************7777799************************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrle 129 + +++lvg++ktLvfykgrapkg+kt+Wvmhe+rle XP_011097658.1 101 VDGTTLVGMRKTLVFYKGRAPKGRKTEWVMHEFRLE 136 *999*****************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.14E-56 | 3 | 163 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 55.138 | 6 | 162 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.8E-26 | 7 | 135 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence Send to blast |
MVEARLPPGF RFHPRDEELI CDYLMKWVRG EQSNKSNSPL LIQVDLNKCE PWDIPESACV 60 GGKEWYFYSQ RDRKYATGIR TNRATISGYW KATGKDRPVC VDGTTLVGMR KTLVFYKGRA 120 PKGRKTEWVM HEFRLEGTLG PGPNTPSLPT KEDWVLCRVF HKNRTEVASK QEITGITTSS 180 SPSPSPSPSL PYKYNVAAFD QNIQATTNDL HHNYEQVSCF SIFPTPPTFS LIDPGSDVSL 240 PPPPTIVSHL LHAGAGAWNH L |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 7e-49 | 2 | 163 | 11 | 169 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that mediates auxin signaling to promote lateral root development. Activates the expression of two downstream auxin-responsive genes, DBP and AIR3. {ECO:0000269|PubMed:11114891}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011097658.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by auxin. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011097656.2 | 1e-109 | NAC domain-containing protein 21/22-like | ||||
Swissprot | Q84TE6 | 1e-86 | NAC22_ARATH; NAC domain-containing protein 21/22 | ||||
TrEMBL | A0A022QIZ7 | 6e-96 | A0A022QIZ7_ERYGU; Uncharacterized protein | ||||
STRING | Migut.M01566.1.p | 1e-96 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56010.2 | 2e-87 | NAC domain containing protein 1 |