PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011097657.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | NAC | ||||||||
Protein Properties | Length: 266aa MW: 29821.9 Da PI: 8.5693 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 167.7 | 4e-52 | 11 | 141 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhP+deel+++yL k v+g++ + ++ + +vd++k+ePwd+p+++ + kewyf+s+rd+kyatg r+nrat sgyWkatgkd++v+ XP_011097657.1 11 LPPGFRFHPRDEELICDYLMKWVRGEQSNKSNSplLIQVDLNKCEPWDIPESACVGGKEWYFYSQRDRKYATGIRTNRATISGYWKATGKDRPVC 105 79************************955544335999************7777799************************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrle 129 + +++lvg++ktLvfykgrapkg+kt+Wvmhe+rle XP_011097657.1 106 VDGTTLVGMRKTLVFYKGRAPKGRKTEWVMHEFRLE 141 *999*****************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.4E-57 | 4 | 168 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 55.138 | 11 | 167 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.0E-26 | 12 | 140 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence Send to blast |
MNSLGMVEAR LPPGFRFHPR DEELICDYLM KWVRGEQSNK SNSPLLIQVD LNKCEPWDIP 60 ESACVGGKEW YFYSQRDRKY ATGIRTNRAT ISGYWKATGK DRPVCVDGTT LVGMRKTLVF 120 YKGRAPKGRK TEWVMHEFRL EGTLGPGPNT PSLPTKEDWV LCRVFHKNRT EVASKQEITG 180 ITTSSSPSPS PSPSLPYKYN VAAFDQNIQA TTNDLHHNYE QVSCFSIFPT PPTFSLIDPG 240 SDVSLPPPPT IVSHLLHAGA GAWNHL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 7e-49 | 7 | 168 | 11 | 169 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that mediates auxin signaling to promote lateral root development. Activates the expression of two downstream auxin-responsive genes, DBP and AIR3. {ECO:0000269|PubMed:11114891}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011097657.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by auxin. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011097656.2 | 1e-109 | NAC domain-containing protein 21/22-like | ||||
Swissprot | Q84TE6 | 1e-87 | NAC22_ARATH; NAC domain-containing protein 21/22 | ||||
TrEMBL | A0A022QIZ7 | 4e-98 | A0A022QIZ7_ERYGU; Uncharacterized protein | ||||
STRING | Migut.M01566.1.p | 6e-99 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56010.2 | 2e-88 | NAC domain containing protein 1 |