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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011097089.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | NAC | ||||||||
Protein Properties | Length: 296aa MW: 34160.5 Da PI: 6.8826 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 162.8 | 1.3e-50 | 10 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lp+GfrFhPtdeelvv+yL+++++g+++ + +i+e+d+yk++Pw+Lp + +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk+v + XP_011097089.1 10 LPAGFRFHPTDEELVVHYLCRRCAGQQIAV-PIIAEIDLYKFDPWQLPGMSLYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPVGK- 102 799*************************99.88***************65556799************************************98. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +kk Lvfy g+ap+g+kt+W+mheyrl XP_011097089.1 103 -PKTLAIKKALVFYAGKAPRGVKTNWIMHEYRL 134 .7789**************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 8.24E-61 | 7 | 160 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 58.612 | 10 | 160 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.4E-26 | 11 | 134 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence Send to blast |
MKGGEQQLNL PAGFRFHPTD EELVVHYLCR RCAGQQIAVP IIAEIDLYKF DPWQLPGMSL 60 YGEKEWYFFS PRDRKYPNGS RPNRAAGTGY WKATGADKPV GKPKTLAIKK ALVFYAGKAP 120 RGVKTNWIMH EYRLANVDRS AGNRNNLRLD DWVLCRIYNK KGTLDKHYMN VDKEAMQFSD 180 SEEQKPEVNG FPYDGMVALV QAPQSLPSQR MNAYTHLNTS ESVPKLHTDS SSSEHAFSPE 240 FEEVKSEPKW SEFEIPTNFQ LNYMDGFQDD PFSSQMQYND QLFLFQDMFG YMQKPF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-83 | 2 | 166 | 7 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011097089.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011097089.1 | 0.0 | NAC domain-containing protein 2 | ||||
Swissprot | Q39013 | 1e-122 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A2G9HUM9 | 0.0 | A0A2G9HUM9_9LAMI; Uncharacterized protein | ||||
STRING | Migut.L00568.1.p | 1e-154 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1239 | 24 | 81 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-124 | NAC family protein |