PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011096434.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 223aa    MW: 24398.9 Da    PI: 8.3241
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011096434.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.61.4e-103986354
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    ++h+e+ErrRR+riN  + +Lr ll +     s+K++Ka+ L +++  +k+L
  XP_011096434.1 39 KSHSEAERRRRERINAHLVTLRGLLAPI----SGKMDKATLLAEVISEVKQL 86
                    58************************96....6*************999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.0753686IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.8E-123995IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.71E-133996IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-83986IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.6E-84292IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MSVKQTLVLD DEKSELVKAS ERMGKKIAVS ESKTMAALKS HSEAERRRRE RINAHLVTLR  60
GLLAPISGKM DKATLLAEVI SEVKQLKKTA RRASEGLHVP TDTNEVQVEK LEDKADDGSV  120
LLRASLCCDY TPDLLSNVKQ AINDLPWQPL KCEISTLGGR VKIVFLITAS GEGNCGSTAA  180
EELHFSSISA ALSNILDKVS ASAEYGGEIF FPQKRRRVSY VDS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14449ERRRRE
2213217KRRRV
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011096434.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011096433.21e-161transcription factor bHLH30-like
TrEMBLA0A2G9H6A16e-91A0A2G9H6A1_9LAMI; Uncharacterized protein
STRINGMigut.H01448.1.p2e-86(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.12e-28bHLH family protein