 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_011096409.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
|
| Family |
TCP |
| Protein Properties |
Length: 360aa MW: 40567 Da PI: 5.7347 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_011096409.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 103.6 | 3.2e-32 | 106 | 188 | 2 | 72 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............ssssase 72
ag+kdrhsk++T++g RdRRvRls +a++f+d+qd+LG+d++sk+i+WL+++ak ai +l + s + +
XP_011096409.1 106 AGRKDRHSKVCTARGTRDRRVRLSPRTAIQFYDVQDRLGYDRPSKAIDWLMKEAKSAIEALHHEppplavdeyfraaNVSEN-H 188
89************************************************************99555544444443211111.1 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 360 aa
Download sequence Send
to blast |
MDIPSSHHLR APDDEEDLLE ELEDGDNSIS EDVAFQDPSQ QTFFSYFNQP QNFNGNSSFD 60
VHLAKIHPQR LMQDQGLNLA SANLKAKRRK AAEIIELHGG RILRSAGRKD RHSKVCTARG 120
TRDRRVRLSP RTAIQFYDVQ DRLGYDRPSK AIDWLMKEAK SAIEALHHEP PPLAVDEYFR 180
AANVSENHSF PKGKLQQKLQ ESGRILNSES GMIQNLEDLN NDNPISCFGL FTNADALLSS 240
TEFRAYPHDC FNSSISRSEA PEDSILYSSY QEGLLSAPLT TPRDIFETNL EMANMQRIFT 300
RNFATGGGEH YSSVNSPPVH FPASQDLGHS LIFSQREPLQ SSNINSSPIS TQFPDRFIPM
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zkt_A | 1e-18 | 113 | 166 | 1 | 54 | Putative transcription factor PCF6 |
| 5zkt_B | 1e-18 | 113 | 166 | 1 | 54 | Putative transcription factor PCF6 |
