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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_011096365.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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| Family |
NAC |
| Protein Properties |
Length: 309aa MW: 34362.7 Da PI: 9.6499 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_011096365.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 108.9 | 5.8e-34 | 57 | 197 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk...... 79
lp+G++F+P+d+e++ e+L++kv +++ ++ e+i+++d i++++P++Lp v+++ + +fF++ +k+y+tg+rk+r+++
XP_011096365.1 57 LPAGVKFDPSDQEIL-EHLEAKVLSDTrklhplID--EFIPTIDgengICYTHPEKLP-GVSKDGQVRHFFHRPSKAYTTGTRKRRKVHtdadgg 147
799***********9.99****9999966653322..23444444445**********.566677888******************744456555 PP
NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
+ +W++tgk+++v + g+ +g kk+Lv+y gr++k+ekt+Wvmh+y+l
XP_011096365.1 148 ETRWHKTGKTRPVSA-AGNIKGYKKILVLYtnYGRQRKPEKTNWVMHQYHL 197
778***********9.9999**********66589**************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:2000652 | Biological Process | regulation of secondary cell wall biogenesis |
| GO:0005634 | Cellular Component | nucleus |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 309 aa
Download sequence Send
to blast |
MTWSNHDQKS LQIIPTSITT TAVANSKPHQ LTTLICPSCG HTIKLQDQSG IQDLPGLPAG 60
VKFDPSDQEI LEHLEAKVLS DTRKLHPLID EFIPTIDGEN GICYTHPEKL PGVSKDGQVR 120
HFFHRPSKAY TTGTRKRRKV HTDADGGETR WHKTGKTRPV SAAGNIKGYK KILVLYTNYG 180
RQRKPEKTNW VMHQYHLGDN EEEKDGELVV SKVFYQTQPR QCGSSTMKDA ILNTTTTSKS 240
RSSSKSSESG FMKNASFVDY YNPPFISYNV GSQNMMNRDS PPPLIPNMVV HGDGSSFIGQ 300
FPSSGSKGK
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that plays a regulatory role in the development of secondary cell wall fibers (PubMed:18952777,PubMed:22133261). Involved in the regulation of cellulose and hemicellulose biosynthetic genes as well as of genes involved in lignin polymerization and signaling (PubMed:22133261). Is not a direct target of SND1 (PubMed:18952777). {ECO:0000269|PubMed:18952777, ECO:0000269|PubMed:22133261}. |
