 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_011096299.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
|
| Family |
HSF |
| Protein Properties |
Length: 200aa MW: 23433.1 Da PI: 9.8757 |
| Description |
HSF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_011096299.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HSF_DNA-bind | 100.5 | 1.6e-31 | 12 | 111 | 2 | 102 |
HHHHHHHHHCTG........GGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXX CS
HSF_DNA-bind 2 Flkklyeilede........elkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkk 88
Fl+k+y++le+e k+++sw+ +gn fvv+ + +f++ +Lp+yFkh+nf+SF+RQLn+YgFkk+ +++ weF+h++F++
XP_011096299.1 12 FLSKTYDLLEEEreaervggGKKKIVSWNLEGNGFVVWCPADFSDLMLPRYFKHNNFSSFIRQLNTYGFKKTASKR---------WEFQHEKFRR 97
9*********888888888899**************************************************9988.........********** PP
XXXXXXXXXXXXXX CS
HSF_DNA-bind 89 gkkellekikrkks 102
g ++ll +++rkk
XP_011096299.1 98 GCRHLLAEMRRKKC 111
***********986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 200 aa
Download sequence Send
to blast |
MSCRKSKCPA PFLSKTYDLL EEEREAERVG GGKKKIVSWN LEGNGFVVWC PADFSDLMLP 60
RYFKHNNFSS FIRQLNTYGF KKTASKRWEF QHEKFRRGCR HLLAEMRRKK CQPSAFPSYL 120
KPSAHHPPTQ DNKSIAATAT ASEVLFMELM EENKKLRRER LELELQIAHF KTMEMKLLEC 180
LSHPTPTHHY PPSIPINYLN
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5hdk_A | 8e-16 | 8 | 109 | 7 | 110 | Heat shock factor protein 2 |
| 5hdk_B | 8e-16 | 8 | 109 | 7 | 110 | Heat shock factor protein 2 |
| 5hdk_C | 8e-16 | 8 | 109 | 7 | 110 | Heat shock factor protein 2 |
| 5hdk_D | 8e-16 | 8 | 109 | 7 | 110 | Heat shock factor protein 2 |
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