![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_011095941.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family |
GRAS |
Protein Properties |
Length: 552aa MW: 61289.8 Da PI: 6.0617 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_011095941.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Sin&pid=XP_011095941.1) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 413.6 | 1.8e-126 | 172 | 552 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdle..........laqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfs 85
l++lL++cAe vs+ d+ +a+al++ l++++s +g+p+qRl ay++e+L+arl++s+s +yk+l+++e + sse ++++++++
XP_011095941.1 172 LKQLLVACAEIVSEADTIsfsdrqvavsAAEALMEILEKQVSVSGEPLQRLGAYMLEGLRARLLSSGSIIYKKLKCKEPT---SSELMSYMHVLY 263
5799********996653333444666699999**********************************************9...99********** PP
GRAS 86 evsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfef 178
+++P++kf+++ aN I ea+e+e+r+H+iDf+i qG QW++++qaL+ R++gpp +RiTg+++++s + l +g+rLa++A+++gvpfef
XP_011095941.1 264 QICPYYKFAYMSANVVIGEAMENENRIHVIDFQIAQGSQWVSFIQALSRRAGGPPYIRITGIDDAQSAhaRGGGLDLVGQRLAQVAKSCGVPFEF 358
****************************************************************9998889999********************* PP
GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdslea 273
+ +a + d++le+L+v++gEalaVn+ + lh+++desv++ ++rd++L+lvkslsPkvv++veqe+++n+++F++rf+e+l+yy+a+f+s++a
XP_011095941.1 359 HG-AAMSGCDVQLENLQVRHGEALAVNFPYILHHMPDESVNTMNHRDRLLRLVKSLSPKVVTLVEQESNTNTSTFFQRFCETLDYYTAMFESIDA 452
**.8999**************************************************************************************** PP
GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLv 368
+re+++ri+ E+++++r++vn++aceg+er+erhe ++kWr rl++aGF+pv+ls ++ ++ +l++++s+ yr+ e +g+l+lgWk+r+L
XP_011095941.1 453 ARAREDRQRISAEEHCVARDVVNIIACEGTERVERHELFGKWRLRLMMAGFSPVQLSPSVGIAIRDMLKEYSSN-YRLAEGHGALYLGWKNRALA 546
99**********************************************************************77.******************** PP
GRAS 369 svSaWr 374
+ SaWr
XP_011095941.1 547 TSSAWR 552
*****8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 552 aa
Download sequence Send
to blast |
MQASQESETS SGFHSFYNRP VQQVEPYGIS TFQVLNNNST SSKSQGSGFS FQTYTEQFFT 60 LESTPATDFA AYNSPSAVSV SSSRSPFSPQ GSHSYGSDLH HSSDNTYGSP LSGSSGVEDE 120 NKLMHALWVL RNELLGPESD TDDSGSFNGI VTQPSPFTRY NRILEMAPHM DLKQLLVACA 180 EIVSEADTIS FSDRQVAVSA AEALMEILEK QVSVSGEPLQ RLGAYMLEGL RARLLSSGSI 240 IYKKLKCKEP TSSELMSYMH VLYQICPYYK FAYMSANVVI GEAMENENRI HVIDFQIAQG 300 SQWVSFIQAL SRRAGGPPYI RITGIDDAQS AHARGGGLDL VGQRLAQVAK SCGVPFEFHG 360 AAMSGCDVQL ENLQVRHGEA LAVNFPYILH HMPDESVNTM NHRDRLLRLV KSLSPKVVTL 420 VEQESNTNTS TFFQRFCETL DYYTAMFESI DAARAREDRQ RISAEEHCVA RDVVNIIACE 480 GTERVERHEL FGKWRLRLMM AGFSPVQLSP SVGIAIRDML KEYSSNYRLA EGHGALYLGW 540 KNRALATSSA WR
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |