PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011095503.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 584aa    MW: 63040.4 Da    PI: 7.0063
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011095503.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.15.7e-31232289260
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk  ers   ++++ei+Y+g+H+h+k
  XP_011095503.1 232 DDGYNWRKYGQKLVKGSEFPRSYYKCTYPNCEVKKIFERSP-SGQITEIVYKGSHDHPK 289
                     8****************************************.9**************85 PP
2WRKY106.21.7e-33400458159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
  XP_011095503.1 400 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 458
                     59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-26220290IPR003657WRKY domain
PROSITE profilePS5081123.066226290IPR003657WRKY domain
SuperFamilySSF1182901.96E-24227290IPR003657WRKY domain
SMARTSM007747.0E-33231289IPR003657WRKY domain
PfamPF031061.4E-23232288IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.4E-37385460IPR003657WRKY domain
SuperFamilySSF1182902.35E-29392460IPR003657WRKY domain
PROSITE profilePS5081138.825395460IPR003657WRKY domain
SMARTSM007743.1E-39400459IPR003657WRKY domain
PfamPF031063.5E-26401458IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009611Biological Processresponse to wounding
GO:0009961Biological Processresponse to 1-aminocyclopropane-1-carboxylic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 584 aa     Download sequence    Send to blast
MEDSHSLPHT SFSRSQHSPS GNATPQLTSA HDHVADGPGA AGSSNGAKYR LMSPAKLPIS  60
RSTCITIPPG LSPTSFLESP VLLSNIKAEP SPTTGSFFKP QLMQGSGENA ALSLQKHISS  120
GNTTDERTSS SFEFRFHTGA NSTSGVSSAG LAIPVGLNRN GPVIHQDQRH TQQSSAPSSL  180
ASQSVAVGIH DSSICSTTDE LNQAGQSNTG NQASSSDHKD SISSVSAERT SDDGYNWRKY  240
GQKLVKGSEF PRSYYKCTYP NCEVKKIFER SPSGQITEIV YKGSHDHPKP QAARRHNPGA  300
LLSIQEDKLD RDLSFTGQED KLNTNNMEQN GSPALSPLQA NEDGVDGSGS QFQAINDEVE  360
EDDPFLKRRK MEDSIDVTPI VKPIREPRVV VQTVSEVDIL DDGYRWRKYG QKVVRGNPNP  420
RSYYKCTNAG CPVRKHVERA SHDPKAVITT YEGKHNHDVP TARNSSHEFA ATAPYGGAPK  480
IRPQESSSIS LDLGVGIGHV AENRTNEQGQ ALDTEAAQSQ IVPNNSSMTV IQASQIPACY  540
GIVNGGLNLY GNRENRVEGH SFQSPPLHPS NQCPQNLGRI LMGP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-37232460877Probable WRKY transcription factor 4
2lex_A4e-37232460877Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00455DAPTransfer from AT4G26640Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011095503.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095503.10.0probable WRKY transcription factor 20
SwissprotQ93WV01e-167WRK20_ARATH; Probable WRKY transcription factor 20
TrEMBLA0A0D5Y9D00.0A0A0D5Y9D0_SALMI; WRKY protein
STRINGMigut.M01679.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40252344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.21e-163WRKY family protein