PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011094877.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | WRKY | ||||||||
Protein Properties | Length: 298aa MW: 32786.4 Da PI: 5.7737 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 102.1 | 3.2e-32 | 118 | 174 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 dDgy+WrKYGqK++k+s++prsYYrCt ++C++kk+vers +dp++++itYeg H h XP_011094877.1 118 DDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSIDDPDTLIITYEGLHLH 174 8******************************************************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 26.842 | 112 | 174 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.1E-29 | 114 | 174 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.75E-27 | 115 | 174 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.1E-36 | 117 | 176 | IPR003657 | WRKY domain |
Pfam | PF03106 | 8.8E-26 | 118 | 174 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence Send to blast |
MDELIKLAGG TTGDDQLLKE LLDDNVSSLF MLPYQARELN SSPWTDSGLL SAAYSGPTVD 60 DIESALSYTN YGVHDFHHGA KPEAHSVSML ERGYIGKASN ENSKYTLRIN NCGNVMADDG 120 YKWRKYGQKS IKNSPNPRSY YRCTNPRCSA KKQVERSIDD PDTLIITYEG LHLHFTYPFF 180 LHQQTNPPMK KQKGPTLEAA HDVGVQTGNG LEKVVPNLGS TPESDPSKEF EQDLMGQQGL 240 LEDVVPLMIR KPLVVVDAIA SSSSSNSSSS TSHESHPSSP SSSNSFSWSP TYSYLGLI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 1e-20 | 116 | 174 | 16 | 74 | Probable WRKY transcription factor 4 |
2lex_A | 1e-20 | 116 | 174 | 16 | 74 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011094877.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011094877.1 | 0.0 | probable WRKY transcription factor 49 | ||||
TrEMBL | A0A0D5YAF9 | 5e-98 | A0A0D5YAF9_SALMI; WRKY protein | ||||
STRING | Migut.J00318.1.p | 5e-95 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12075 | 21 | 24 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43290.1 | 2e-50 | WRKY DNA-binding protein 49 |