PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011094113.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

bHLH

Protein Properties

Length: 269aa MW: 31022.1 Da PI: 4.5915

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011094113.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.9	7.4e-13	79	123	5	54
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 + ++E++RR+++N+++ Lr ++P+ + K++K++i++ A++YI+ L XP_011094113.1 79 NIIAEKNRRKKLNERLYALRAVVPNiS------KMDKISIVRDAIDYIQAL 123 5689*******************66......**************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	16.494	74	123	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	5.23E-17	75	140	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.53E-12	77	128	No hit	No description
Pfam	PF00010	2.0E-10	79	123	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	8.0E-15	80	129	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	2.7E-16	80	141	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence Send to blast
MYMILSTLKT QPSSLSPFIS HFSSQPKLTM EDFDDYNNYW ETGMFLQTEE LDSYFDEHIS 60 AYYDSSSPDG AQSSLASKNI IAEKNRRKKL NERLYALRAV VPNISKMDKI SIVRDAIDYI 120 QALHDEERRI QAEISELESE RATNFEYEQE ATTFYSKPKR TRMENYYDYS APRLMSSPIE 180 VLELRVSNMG EKTIVVSLTC SKRTDTMVKL CEIFESLKLK VITANITAFS ERLLKTVFLE 240 ADEEEKEDVR LKIEAAIAAL NDPDSPMSI

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011094113.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011094113.1	0.0	transcription factor bHLH35 isoform X2
Swissprot	Q2HIV9	4e-82	BH035_ARATH; Transcription factor bHLH35
TrEMBL	A0A2G9GQW6	1e-132	A0A2G9GQW6_9LAMI; Uncharacterized protein
STRING	XP_009760780.1	1e-119	(Nicotiana sylvestris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57150.1	1e-85	bHLH family protein