PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011094111.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 287aa    MW: 33019.1 Da    PI: 4.5202
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011094111.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.88.2e-1397141554
                     HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     + ++E++RR+++N+++  Lr ++P+ +      K++K++i++ A++YI+ L
  XP_011094111.1  97 NIIAEKNRRKKLNERLYALRAVVPNiS------KMDKISIVRDAIDYIQAL 141
                     5689*********************66......****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.49492141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.89E-1793158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.63E-1395146No hitNo description
PfamPF000102.2E-1097141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.0E-1598147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-1698159IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MYMILSTLKT QPSSLSPFIS HFSSQPKLTM EDFDDYNNYW ETGMFLQTEE LDSYFDEHIS  60
AYYDSGSNGC SYFDEHISAY YDSSSPDGAQ SSLASKNIIA EKNRRKKLNE RLYALRAVVP  120
NISKMDKISI VRDAIDYIQA LHDEERRIQA EISELESERA TNFEYEQEAT TFYSKPKRTR  180
MENYYDYSAP RLMSSPIEVL ELRVSNMGEK TIVVSLTCSK RTDTMVKLCE IFESLKLKVI  240
TANITAFSER LLKTVFLEAD EEEKEDVRLK IEAAIAALND PDSPMSI
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011094111.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094111.10.0transcription factor bHLH35 isoform X1
RefseqXP_011094112.10.0transcription factor bHLH35 isoform X1
SwissprotQ2HIV96e-80BH035_ARATH; Transcription factor bHLH35
TrEMBLA0A2G9GQW61e-127A0A2G9GQW6_9LAMI; Uncharacterized protein
STRINGXP_009760780.11e-116(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29232451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.12e-83bHLH family protein