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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_011093944.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family |
bHLH |
Protein Properties |
Length: 595aa MW: 65982.7 Da PI: 7.3178 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_011093944.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 38.2 | 2.6e-12 | 426 | 472 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
+h e+Er+RR+++N+ f Lr ++P+ + K++Ka+ L A+ YI +Lq
XP_011093944.1 426 NHVEAERQRREKLNQYFYALRAVVPNiS------KMDKASLLGDAIAYITELQ 472
799***********************66......*****************99 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 595 aa
Download sequence Send
to blast |
MGGVGWYNED KAMAAAVLGT KAFDYLMSSS VSAECSLMAM GNDENLQNKL SDLVEHPNAS 60 KFCWNYAIFW QLSRSKSGDL VLGWGDGCCR EPREDEESEV TRILKMRLED ESQQRMRKRV 120 LQKLHTLFGG SDEDSYAFGL DRVTDTEMFF LASMYFSFPR GEGGPGRCFG SSKHVWLSDA 180 LKPSVDYCVR SFLAKCAGMQ TIVLIPTDVG VVELGSVRCI PESLELLKVI GSSFSSFSSL 240 IRAKQAAVIT DKNDANGPIR NLVIGNRPEV VPKIFGQDLN SGRMQFKEKV AVSHEEDRTW 300 NASKMPFANS RNGFHGATWS QFANVKPGKA VEIYNPQTSA NKVPELVNGA REEFLLNNFQ 360 HQKPAQMQID FTGATSRPII SHPHNGESEH SDIEASCKEE PAGLLEDKRP RKRGRKPANG 420 REEPLNHVEA ERQRREKLNQ YFYALRAVVP NISKMDKASL LGDAIAYITE LQKKVKDMES 480 ERERLGSVPR EASGSEANPK AEMQDTASSI DVEACRDIVT VRVSCPLRTH PASRVIRAIN 540 DAEATIIEAK MATGSERVFH TFVVKSKGSE GVTKEKLIEA LSHKSNSSQP MSSLG
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5gnj_A | 1e-28 | 420 | 482 | 2 | 64 | Transcription factor MYC2 |
5gnj_B | 1e-28 | 420 | 482 | 2 | 64 | Transcription factor MYC2 |
5gnj_E | 1e-28 | 420 | 482 | 2 | 64 | Transcription factor MYC2 |
5gnj_F | 1e-28 | 420 | 482 | 2 | 64 | Transcription factor MYC2 |
5gnj_G | 1e-28 | 420 | 482 | 2 | 64 | Transcription factor MYC2 |
5gnj_I | 1e-28 | 420 | 482 | 2 | 64 | Transcription factor MYC2 |
5gnj_M | 1e-28 | 420 | 482 | 2 | 64 | Transcription factor MYC2 |
5gnj_N | 1e-28 | 420 | 482 | 2 | 64 | Transcription factor MYC2 |
Search in ModeBase |
Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 407 | 415 | KRPRKRGRK |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that negatively regulates jasmonate (JA) signaling (PubMed:30610166). Negatively regulates JA-dependent response to wounding, JA-induced expression of defense genes, JA-dependent responses against herbivorous insects, and JA-dependent resistance against Botrytis cinerea infection (PubMed:30610166). Plays a positive role in resistance against the bacterial pathogen Pseudomonas syringae pv tomato DC3000 (PubMed:30610166). {ECO:0000269|PubMed:30610166}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by wounding, feeding with herbivorous insects, infection with the fungal pathogen Botrytis cinerea and infection with the bacterial pathogen Pseudomonas syringae pv tomato DC3000. {ECO:0000269|PubMed:30610166}. |