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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_011093390.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family |
HD-ZIP |
Protein Properties |
Length: 373aa MW: 41055.5 Da PI: 6.0947 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_011093390.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 58.2 | 1.4e-18 | 208 | 262 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++tkeq Lee F+++++p+ +++ LAk+l+L rqV vWFqNrRa+ k
XP_011093390.1 208 RKKLRLTKEQSAFLEESFKEHNTPNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 262
788899***********************************************98 PP
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2 | HD-ZIP_I/II | 124.1 | 6.5e-40 | 208 | 298 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
+kk+rl+keq+++LEesF+e+++ +p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk
XP_011093390.1 208 RKKLRLTKEQSAFLEESFKEHNTPNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELR-ALK 298
69*************************************************************************************9.555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 373 aa
Download sequence Send
to blast |
MELGLSLGDA TKPFGFLKEN NTQKQQNAAI SKKSGLDFCI ALGLSSSTVG DGDREKTQRS 60 QEDDDEDDDD DDDQSSEGDG SDDTQGETHL QLNLRPLAPV HRRVSPRLLS LPWSSDNGSS 120 ENGSSGNMGL PAAKGFDVNR LPAAAEEVSS ANSVGSPFQR DFGMYRRPGN GNLGGSKRDF 180 EATGNDVVEA ERASSRASDD DENGLNTRKK LRLTKEQSAF LEESFKEHNT PNPKQKLALA 240 KQLNLRPRQV EVWFQNRRAR TKLKQTEVDC EYLKRCCETL TEENRRLHKE LQELRALKTS 300 NPFYMQSPAT TLTMCPSCER VATTTTTTTA PPPVSAASGK MAPIPKAIPF PLTRPRFFPF 360 PQTPTHPNQP AAS
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 206 | 212 | TRKKLRL |
2 | 256 | 264 | RRARTKLKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ072950 | 7e-60 | KJ072950.1 Sesamum indicum clone TilSSR_44151 microsatellite Sesame_44151 sequence. |