PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011093108.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 315aa    MW: 35438.5 Da    PI: 6.1806
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011093108.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.98.1e-21119169155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp+    r +r++lg+++taeeAa a+++a+ +++g
  XP_011093108.1 119 KKFRGVRQRP-WGKWAAEIRDPT----RrTRVWLGTYDTAEEAATAYDRAAIQIRG 169
                     59********.**********84....34************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.54E-34119176No hitNo description
SuperFamilySSF541715.75E-23120177IPR016177DNA-binding domain
PfamPF008477.7E-15120169IPR001471AP2/ERF domain
SMARTSM003801.5E-39120183IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.3E-32120177IPR001471AP2/ERF domain
PROSITE profilePS5103224.052120177IPR001471AP2/ERF domain
PRINTSPR003673.0E-11121132IPR001471AP2/ERF domain
PRINTSPR003673.0E-11143159IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MTSKISEPVK LSVHITTTTK SVSPASLKNH PSGGGGFSPK TPRLVRILVT DRDATDSSSD  60
EGESLRRVKK HVNEVRMVRV SVYPDRNDGE SSRNLTKKKR PPSLPHEASA EPLVGGKGKK  120
FRGVRQRPWG KWAAEIRDPT RRTRVWLGTY DTAEEAATAY DRAAIQIRGP NAVTNFTKPP  180
EADVTCVSGY ESRKEEWCEN LRSPTSVLKI NTNSATFVRS EFKNINNDMD QLNPTNSCSK  240
VEPAPAPIGR SSEGDFFIND CAVWDQYFSN NYFDFRSPTP LIYDEIRLEE DFIELGDDLE  300
SLTWDVDELF VDGFW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-22116176162ATERF1
3gcc_A6e-22116176162ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011093108.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093108.10.0pathogenesis-related genes transcriptional activator PTI6
TrEMBLA0A2Z7BUG82e-95A0A2Z7BUG8_9LAMI; Uncharacterized protein
STRINGMigut.B01832.1.p6e-65(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49423126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.14e-37cytokinin response factor 4