PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011092862.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 329aa    MW: 36798.7 Da    PI: 6.6084
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011092862.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.5e-104998154
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    r++ +  rE+ RRdr+N+ f eL   l ++     +K++Ka+iL+ +++ +k+L
  XP_011092862.1 49 RKVQKADREKLRRDRLNEQFMELGNALDPD----RPKNDKASILTDTIQMLKDL 98
                    5677889********************997....79****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.4E-1248121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.34898IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474598.9E-1448117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.53E-849102No hitNo description
PfamPF000105.2E-84998IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.6E-854104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MDQLNPDSLF QSIPSSSNFQ PSPDARGTST RPHQDCRMEG EAKDSVTARK VQKADREKLR  60
RDRLNEQFME LGNALDPDRP KNDKASILTD TIQMLKDLTS QVDRLKSEYA ALTEESRELT  120
QEKNDLREEK ASLKSDIENL NAQYQQRLRA MYPWSGMDHS VVMHPSSYPF PMPVPIPTGP  180
IPLHPSLQPY PFYANQNPAV VPNPCSTYVP YMIHNTMIEQ QSTQHVSQVM QQGTRSHVSS  240
KQDHRNRSSD GESRIEKSDD SNDITTDLEL KTPGSTSEQD SSSKQRKSKK IVRKETSITD  300
GSSSSGCSST HSVQAISSNS VAGGKKTDD
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011092862.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011092862.10.0transcription factor bHLH121
SwissprotQ9LT231e-95BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A2G9HAG10.0A0A2G9HAG1_9LAMI; Uncharacterized protein
STRINGMigut.N01282.1.p1e-150(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA54562434
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.12e-86bHLH family protein
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Min JH, et al.
    Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
    Front Plant Sci, 2017. 8: p. 2100
    [PMID:29321786]