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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011091920.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | GeBP | ||||||||
Protein Properties | Length: 375aa MW: 42206 Da PI: 5.3913 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 120.2 | 1e-37 | 158 | 253 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 lfqrlwse+Deiv+LqG+id+ k++ +p++d++af++f+kk+++++v+++ql +KirrL+kK+++++ k k+gk+ +fsk+h+qk++elskkiW XP_011091920.1 158 LFQRLWSEDDEIVILQGMIDYVIKKKFDPVADLSAFHDFIKKNLHVDVTRTQLQDKIRRLRKKYENNKCKEKEGKDRTFSKPHEQKAYELSKKIW 252 69********************************************************************************************* PP DUF573 97 g 97 g XP_011091920.1 253 G 253 8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 3.1E-34 | 159 | 253 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 375 aa Download sequence Send to blast |
MAKNWEPKKP VESETESGEE EDDEATSKDA GSQDSDSEPD LAQKAQPQSS SQPQPQLPSS 60 SDEEESGSES ESESDEPDPN VKPIASKPME NEQKSNDGAR KLRSKPIASD LVTPAKSTAT 120 KRPAEEKETE TKDAKKWKKK AEPDTCEKKS TDDSKKLLFQ RLWSEDDEIV ILQGMIDYVI 180 KKKFDPVADL SAFHDFIKKN LHVDVTRTQL QDKIRRLRKK YENNKCKEKE GKDRTFSKPH 240 EQKAYELSKK IWGNESGKEN GVEKVMGNGS ALRKNPSKRP NTVENEEAKD VKSVEVVNSD 300 PERLLPAKRV NSGGVTVEER ILRIGAEYFE SGKGLEGEKE WKKLRVEEME VNLRQLEVKT 360 AQAKLILDAV KSGGH |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011091920.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011096164.1 | 0.0 | GLABROUS1 enhancer-binding protein-like | ||||
Refseq | XP_020552877.1 | 0.0 | GLABROUS1 enhancer-binding protein-like | ||||
TrEMBL | A0A2Z7D2M7 | 1e-110 | A0A2Z7D2M7_9LAMI; Mediator-associated protein 1 | ||||
STRING | Migut.M01263.1.p | 1e-108 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3042 | 19 | 47 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00390.1 | 5e-24 | DNA-binding storekeeper protein-related transcriptional regulator |