PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

XP_011091199.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

Nin-like

Protein Properties

Length: 707aa MW: 80180.7 Da PI: 6.352

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011091199.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	48.8	1.4e-15	544	585	5	46
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPh 46 i edl+ yF +++kdA k Lgv+ ++LKr+CR ++I RWP+ XP_011091199.1 544 ICYEDLRPYFGKSLKDAEKGLGVSRSTLKRACRDHNITRWPS 585 7789*************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	13.003	525	611	IPR003035	RWP-RK domain
Pfam	PF02042	8.3E-15	544	590	IPR003035	RWP-RK domain
SuperFamily	SSF54277	2.88E-17	616	705	No hit	No description
SMART	SM00666	1.7E-13	625	707	IPR000270	PB1 domain
PROSITE profile	PS51745	16.542	625	707	IPR000270	PB1 domain
Gene3D	G3DSA:3.10.20.240	8.7E-18	628	705	No hit	No description
Pfam	PF00564	1.2E-11	631	705	IPR000270	PB1 domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 707 aa Download sequence Send to blast
MMTEFLSAMM AAEEIYSIVP GELENCQEKY SISAFAEHLE TKLCWSMWGR KHHMFRWIFW 60 SPEQEELEGP QTISSTCYPK SIPSTLTNHG TFIKEKIKCS LQRIIECYID YCLVQFWAPK 120 TAGGRCFLTT SGQPFAVDWL CKGFCWYRKH CSSHDYLVDG EANEAELGPP GRVFQSGLPE 180 SSPDLRLYST KEYPLRNQAL SCGIKGYMAL PLFDLLGQDC VGVLEFVVFS AEYINIVNEV 240 EEGLKTADLR WTLNINQPCL EASLLQNEKD RGGQQLALNE IKQMFEVLKR SAQLHLAQAW 300 ITSMNSLEVE NTPNSGTILM ERAIFKVFVD YEDDYNSPTT HFLKACKLHS LIVGKGIVGR 360 ILATCESFFC PSVSNFSITE YPLVHYARSA RLTVSFAICL QSSLTGDDIY VLEFFLLPGS 420 SDGGYSWSFL SFLLTIMERQ LNSFKVATGQ LLGEELSVKA IEFCKDNGFD SFKLGHSVPY 480 PLKFETLHYG EDMSKLRSVF GHLNFGCDVM DCSVEQNSMA AEKSKRATTL RPSKRERERT 540 NFRICYEDLR PYFGKSLKDA EKGLGVSRST LKRACRDHNI TRWPSNEKNK VNPSLFLTRA 600 ANKSSPCRKG QFSRSDFHPT SDSGFMIVEA DFEGDTMKFK FPFSSGMEKL EEEVARRLKL 660 NVTSFRMKYL DGEGKWILLA CDDDLQFCME TLASSGSNAV KMLVQSI

Sequence ? help Back to Top

Protein Sequence Length: 707 aa Download sequence Send to blast

MMTEFLSAMM AAEEIYSIVP GELENCQEKY SISAFAEHLE TKLCWSMWGR KHHMFRWIFW  60
SPEQEELEGP QTISSTCYPK SIPSTLTNHG TFIKEKIKCS LQRIIECYID YCLVQFWAPK  120
TAGGRCFLTT SGQPFAVDWL CKGFCWYRKH CSSHDYLVDG EANEAELGPP GRVFQSGLPE  180
SSPDLRLYST KEYPLRNQAL SCGIKGYMAL PLFDLLGQDC VGVLEFVVFS AEYINIVNEV  240
EEGLKTADLR WTLNINQPCL EASLLQNEKD RGGQQLALNE IKQMFEVLKR SAQLHLAQAW  300
ITSMNSLEVE NTPNSGTILM ERAIFKVFVD YEDDYNSPTT HFLKACKLHS LIVGKGIVGR  360
ILATCESFFC PSVSNFSITE YPLVHYARSA RLTVSFAICL QSSLTGDDIY VLEFFLLPGS  420
SDGGYSWSFL SFLLTIMERQ LNSFKVATGQ LLGEELSVKA IEFCKDNGFD SFKLGHSVPY  480
PLKFETLHYG EDMSKLRSVF GHLNFGCDVM DCSVEQNSMA AEKSKRATTL RPSKRERERT  540
NFRICYEDLR PYFGKSLKDA EKGLGVSRST LKRACRDHNI TRWPSNEKNK VNPSLFLTRA  600
ANKSSPCRKG QFSRSDFHPT SDSGFMIVEA DFEGDTMKFK FPFSSGMEKL EEEVARRLKL  660
NVTSFRMKYL DGEGKWILLA CDDDLQFCME TLASSGSNAV KMLVQSI

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011091199.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011091199.1	0.0	protein NLP6

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA13879	9	11

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	8e-77	Nin-like family protein