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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_011090405.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
|
| Family |
SRS |
| Protein Properties |
Length: 318aa MW: 34149.7 Da PI: 7.9254 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_011090405.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 219 | 1e-67 | 90 | 246 | 2 | 155 |
DUF702 2 rsgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqla..aasskaaasa...aeaaskrkrelkskkqsalsstkl 91
r g++sCqdCGnqakkdCah+RCRtCCksrgf+C+thvkstWvp+akrrerqqq++ a+++++ +++ +e + kr+re + + +++l +t++
XP_011090405.1 90 RGGGISCQDCGNQAKKDCAHMRCRTCCKSRGFQCQTHVKSTWVPVAKRRERQQQQQlaALQQNQRQENkqeRETSVKRQRE-NPSPSNSLVCTRI 183
56889**********************************************776651044444444444434445555555.4888999999999 PP
DUF702 92 ssaeskkeletsslPeevsseavfrcvrvs.svddgeeelaYqtavsigGhvfkGiLydqGleek 155
++++s le ++P+evs+eavfrcvrvs +vdd+e+++aYqtavsi GhvfkG+LydqG+e++
XP_011090405.1 184 PTTTSG--LELGNFPSEVSAEAVFRCVRVSgAVDDAENQYAYQTAVSICGHVFKGLLYDQGTENQ 246
998765..88899****************8479****************************9975 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 318 aa
Download sequence Send
to blast |
MAGFFSLGGG GGRGRGISNS NPDQETTGHH NPSSEINPES WFLFRNEEIH HQYRGFELWQ 60
PLQQPHHQVG GNPLQDLYAS AGGLAVGPSR GGGISCQDCG NQAKKDCAHM RCRTCCKSRG 120
FQCQTHVKST WVPVAKRRER QQQQQLAALQ QNQRQENKQE RETSVKRQRE NPSPSNSLVC 180
TRIPTTTSGL ELGNFPSEVS AEAVFRCVRV SGAVDDAENQ YAYQTAVSIC GHVFKGLLYD 240
QGTENQYMAA GETSSGGGSV SAGVQQLNLI TGTSATATSN PAGGGGGSSV SPFLDPSLFP 300
APINSFMAGT QFFPPPRS
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371, PubMed:24142382). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371, PubMed:24142382). Acts synergistically with MYC1 in the transactivation of TPS5 (PubMed:24884371). {ECO:0000269|PubMed:24142382, ECO:0000269|PubMed:24884371}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KJ071393 | 2e-56 | KJ071393.1 Sesamum indicum clone TilSSR_42594 microsatellite Sesame_42594 sequence. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT3G51060.1 | 1e-69 | Lateral root primordium (LRP) protein-related |
