PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011090104.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 343aa    MW: 38645.4 Da    PI: 4.6849
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011090104.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.67.1e-11153196755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     + ErrRR r+++++  Lr+l+P+      +K++Ka+i+  Av Y+++Lq
  XP_011090104.1 153 ISERRRRGRMKEKLYALRSLVPNI-----TKMDKASIVGDAVLYVQDLQ 196
                     67*********************7.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.46E-12138198No hitNo description
SuperFamilySSF474594.84E-16144211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.186146195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-16148212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.7E-13152201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-8153196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0034756Biological Processregulation of iron ion transport
GO:0071281Biological Processcellular response to iron ion
GO:0071369Biological Processcellular response to ethylene stimulus
GO:0071732Biological Processcellular response to nitric oxide
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MERLTGEETG INPFQEYAIT TTADFGLIDF MDSETNLDQF IDLIRGDNAA DDPIANFTSQ  60
PLDRDQFSCL ANVDQLFPPA HDQLFDDLDV AINHVVNIST PPDCSALDQV EKRDDDEDHD  120
VVDEEEESSA TTANTSVEKQ RKSSKTDRSR TLISERRRRG RMKEKLYALR SLVPNITKMD  180
KASIVGDAVL YVQDLQMQAK KLKSEIAGLE SSILTRGNIT KYQDRTTHNS KKLKPTSFYP  240
STVLLKKISK MDVFQVEEGG FYVRVVCDKG KGVAVALYKA LQSLKSFRVQ NSNLATCAEN  300
YVFTFNLMQI TEVEVDVNLQ SLKMWVASVF RNQGFDFDTS PST
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011090104.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011090104.10.0transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like
TrEMBLA0A2G9GWF61e-100A0A2G9GWF6_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37822340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.14e-68FER-like regulator of iron uptake